Protein–RNA interactions for Protein: Q8NDG6

TDRD9, ATP-dependent RNA helicase TDRD9, humanhuman

Known RBP Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TDRD9Q8NDG6 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC30.69■■■□□ 2.5
TDRD9Q8NDG6 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC30.69■■■□□ 2.5
TDRD9Q8NDG6 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
TDRD9Q8NDG6 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC30.69■■■□□ 2.5
TDRD9Q8NDG6 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
TDRD9Q8NDG6 AL357033.4-201ENST00000617703 1807 ntBASIC30.69■■■□□ 2.5
TDRD9Q8NDG6 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC30.69■■■□□ 2.5
TDRD9Q8NDG6 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
TDRD9Q8NDG6 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC30.69■■■□□ 2.5
TDRD9Q8NDG6 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC30.68■■■□□ 2.5
TDRD9Q8NDG6 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
TDRD9Q8NDG6 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC30.68■■■□□ 2.5
TDRD9Q8NDG6 AL591424.1-201ENST00000442569 1213 ntBASIC30.68■■■□□ 2.5
TDRD9Q8NDG6 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC30.68■■■□□ 2.5
TDRD9Q8NDG6 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
TDRD9Q8NDG6 LBX2-AS1-202ENST00000603175 2083 ntBASIC30.68■■■□□ 2.5
TDRD9Q8NDG6 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC30.68■■■□□ 2.5
TDRD9Q8NDG6 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
TDRD9Q8NDG6 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
TDRD9Q8NDG6 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC30.68■■■□□ 2.5
TDRD9Q8NDG6 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
TDRD9Q8NDG6 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC30.68■■■□□ 2.5
TDRD9Q8NDG6 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
TDRD9Q8NDG6 Z83851.2-201ENST00000609564 659 ntBASIC30.67■■■□□ 2.5
TDRD9Q8NDG6 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
TDRD9Q8NDG6 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
TDRD9Q8NDG6 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
TDRD9Q8NDG6 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
TDRD9Q8NDG6 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC30.67■■■□□ 2.5
TDRD9Q8NDG6 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC30.67■■■□□ 2.5
TDRD9Q8NDG6 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
TDRD9Q8NDG6 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
TDRD9Q8NDG6 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
TDRD9Q8NDG6 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
TDRD9Q8NDG6 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC30.66■■■□□ 2.5
TDRD9Q8NDG6 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC30.66■■■□□ 2.5
TDRD9Q8NDG6 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC30.66■■■□□ 2.5
TDRD9Q8NDG6 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
TDRD9Q8NDG6 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
TDRD9Q8NDG6 AC134684.3-201ENST00000641758 218 ntBASIC30.66■■■□□ 2.5
TDRD9Q8NDG6 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
TDRD9Q8NDG6 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
TDRD9Q8NDG6 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
TDRD9Q8NDG6 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC30.66■■■□□ 2.5
TDRD9Q8NDG6 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC30.66■■■□□ 2.5
TDRD9Q8NDG6 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC30.66■■■□□ 2.5
TDRD9Q8NDG6 RPS2P28-201ENST00000314255 741 ntBASIC30.66■■■□□ 2.5
TDRD9Q8NDG6 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC30.66■■■□□ 2.5
TDRD9Q8NDG6 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC30.66■■■□□ 2.5
TDRD9Q8NDG6 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC30.66■■■□□ 2.5
TDRD9Q8NDG6 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC30.66■■■□□ 2.5
TDRD9Q8NDG6 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC30.66■■■□□ 2.5
TDRD9Q8NDG6 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC30.66■■■□□ 2.5
TDRD9Q8NDG6 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
TDRD9Q8NDG6 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
TDRD9Q8NDG6 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
TDRD9Q8NDG6 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC30.65■■■□□ 2.5
TDRD9Q8NDG6 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC30.65■■■□□ 2.5
TDRD9Q8NDG6 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC30.65■■■□□ 2.5
TDRD9Q8NDG6 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC30.65■■■□□ 2.5
TDRD9Q8NDG6 KRT8P50-201ENST00000562022 1438 ntBASIC30.65■■■□□ 2.5
TDRD9Q8NDG6 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
TDRD9Q8NDG6 AC092667.1-201ENST00000434301 2586 ntBASIC30.65■■■□□ 2.5
TDRD9Q8NDG6 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
TDRD9Q8NDG6 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC30.65■■■□□ 2.5
TDRD9Q8NDG6 KRT18P3-201ENST00000451602 1288 ntBASIC30.65■■■□□ 2.5
TDRD9Q8NDG6 AC092910.1-201ENST00000482027 1129 ntBASIC30.65■■■□□ 2.5
TDRD9Q8NDG6 RNA5SP415-201ENST00000517246 115 ntBASIC30.65■■■□□ 2.5
TDRD9Q8NDG6 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC30.65■■■□□ 2.5
TDRD9Q8NDG6 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC30.65■■■□□ 2.5
TDRD9Q8NDG6 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC30.65■■■□□ 2.5
TDRD9Q8NDG6 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
TDRD9Q8NDG6 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC30.65■■■□□ 2.5
TDRD9Q8NDG6 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC30.64■■■□□ 2.5
TDRD9Q8NDG6 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
TDRD9Q8NDG6 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
TDRD9Q8NDG6 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
TDRD9Q8NDG6 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC30.64■■■□□ 2.5
TDRD9Q8NDG6 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
TDRD9Q8NDG6 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
TDRD9Q8NDG6 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
TDRD9Q8NDG6 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.5
TDRD9Q8NDG6 PALM-208ENST00000592155 2272 ntTSL 4 BASIC30.64■■■□□ 2.5
TDRD9Q8NDG6 USP39-204ENST00000409766 2033 ntTSL 2 BASIC30.64■■■□□ 2.5
TDRD9Q8NDG6 AC112777.1-201ENST00000540175 1423 ntBASIC30.64■■■□□ 2.5
TDRD9Q8NDG6 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC30.64■■■□□ 2.5
TDRD9Q8NDG6 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
TDRD9Q8NDG6 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC30.64■■■□□ 2.5
TDRD9Q8NDG6 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC30.64■■■□□ 2.5
TDRD9Q8NDG6 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
TDRD9Q8NDG6 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC30.64■■■□□ 2.49
TDRD9Q8NDG6 INTS4P1-201ENST00000438455 1935 ntBASIC30.63■■■□□ 2.49
TDRD9Q8NDG6 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC30.63■■■□□ 2.49
TDRD9Q8NDG6 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
TDRD9Q8NDG6 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC30.63■■■□□ 2.49
TDRD9Q8NDG6 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
TDRD9Q8NDG6 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC30.63■■■□□ 2.49
TDRD9Q8NDG6 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
TDRD9Q8NDG6 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC30.63■■■□□ 2.49
TDRD9Q8NDG6 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC30.63■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms