Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC89Q8N998 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC89Q8N998 KRT8P11-201ENST00000409686 1436 ntBASIC19.37■□□□□ 0.69
CCDC89Q8N998 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
CCDC89Q8N998 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC89Q8N998 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.37■□□□□ 0.69
CCDC89Q8N998 NIFKP9-201ENST00000419265 221 ntBASIC19.37■□□□□ 0.69
CCDC89Q8N998 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CCDC89Q8N998 POU5F1P3-201ENST00000428824 1078 ntBASIC19.37■□□□□ 0.69
CCDC89Q8N998 AP002982.1-201ENST00000492365 877 ntBASIC19.37■□□□□ 0.69
CCDC89Q8N998 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.37■□□□□ 0.69
CCDC89Q8N998 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC89Q8N998 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CCDC89Q8N998 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.37■□□□□ 0.69
CCDC89Q8N998 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.37■□□□□ 0.69
CCDC89Q8N998 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC89Q8N998 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC89Q8N998 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC89Q8N998 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC89Q8N998 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC89Q8N998 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC89Q8N998 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC89Q8N998 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC89Q8N998 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC89Q8N998 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC89Q8N998 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC89Q8N998 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC89Q8N998 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC89Q8N998 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC89Q8N998 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.36■□□□□ 0.69
CCDC89Q8N998 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC89Q8N998 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC89Q8N998 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC89Q8N998 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC89Q8N998 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.36■□□□□ 0.69
CCDC89Q8N998 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC89Q8N998 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC89Q8N998 PRSS44-201ENST00000515154 1146 ntBASIC19.36■□□□□ 0.69
CCDC89Q8N998 RN7SL471P-201ENST00000580476 299 ntBASIC19.36■□□□□ 0.69
CCDC89Q8N998 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CCDC89Q8N998 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC89Q8N998 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.36■□□□□ 0.69
CCDC89Q8N998 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
CCDC89Q8N998 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CCDC89Q8N998 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.36■□□□□ 0.69
CCDC89Q8N998 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC89Q8N998 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC89Q8N998 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CCDC89Q8N998 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC89Q8N998 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC89Q8N998 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC89Q8N998 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC89Q8N998 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.35■□□□□ 0.69
CCDC89Q8N998 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC89Q8N998 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC89Q8N998 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.35■□□□□ 0.69
CCDC89Q8N998 AC068880.1-201ENST00000507289 2297 ntBASIC19.35■□□□□ 0.69
CCDC89Q8N998 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC89Q8N998 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC89Q8N998 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC89Q8N998 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CCDC89Q8N998 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC89Q8N998 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC89Q8N998 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC89Q8N998 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC89Q8N998 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC89Q8N998 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CCDC89Q8N998 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.35■□□□□ 0.69
CCDC89Q8N998 AC006058.3-201ENST00000606217 1069 ntBASIC19.35■□□□□ 0.69
CCDC89Q8N998 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CCDC89Q8N998 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.35■□□□□ 0.69
CCDC89Q8N998 AC073648.6-201ENST00000641589 218 ntBASIC19.35■□□□□ 0.69
CCDC89Q8N998 AC068587.9-201ENST00000641814 219 ntBASIC19.35■□□□□ 0.69
CCDC89Q8N998 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.35■□□□□ 0.69
CCDC89Q8N998 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
CCDC89Q8N998 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.35■□□□□ 0.69
CCDC89Q8N998 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC89Q8N998 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC89Q8N998 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC89Q8N998 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC89Q8N998 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
CCDC89Q8N998 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC89Q8N998 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.35■□□□□ 0.69
CCDC89Q8N998 MTMR9LP-203ENST00000426597 1545 ntBASIC19.35■□□□□ 0.69
CCDC89Q8N998 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC89Q8N998 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC89Q8N998 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CCDC89Q8N998 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC89Q8N998 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC89Q8N998 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
CCDC89Q8N998 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC89Q8N998 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC89Q8N998 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC89Q8N998 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CCDC89Q8N998 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC89Q8N998 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC89Q8N998 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
CCDC89Q8N998 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC89Q8N998 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC89Q8N998 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms