Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDH20Q8N6Y1 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDH20Q8N6Y1 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDH20Q8N6Y1 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDH20Q8N6Y1 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDH20Q8N6Y1 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDH20Q8N6Y1 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDH20Q8N6Y1 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.04■□□□□ 0.64
PCDH20Q8N6Y1 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.04■□□□□ 0.64
PCDH20Q8N6Y1 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.04■□□□□ 0.64
PCDH20Q8N6Y1 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDH20Q8N6Y1 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
PCDH20Q8N6Y1 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
PCDH20Q8N6Y1 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDH20Q8N6Y1 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDH20Q8N6Y1 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDH20Q8N6Y1 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.04■□□□□ 0.64
PCDH20Q8N6Y1 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDH20Q8N6Y1 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
PCDH20Q8N6Y1 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDH20Q8N6Y1 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDH20Q8N6Y1 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
PCDH20Q8N6Y1 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDH20Q8N6Y1 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDH20Q8N6Y1 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDH20Q8N6Y1 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDH20Q8N6Y1 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDH20Q8N6Y1 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDH20Q8N6Y1 TSPY5P-201ENST00000426936 936 ntBASIC19.03■□□□□ 0.64
PCDH20Q8N6Y1 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.03■□□□□ 0.64
PCDH20Q8N6Y1 AC063952.2-201ENST00000498792 1227 ntBASIC19.03■□□□□ 0.64
PCDH20Q8N6Y1 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDH20Q8N6Y1 LINC01238-205ENST00000567549 1107 ntBASIC19.03■□□□□ 0.64
PCDH20Q8N6Y1 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.03■□□□□ 0.64
PCDH20Q8N6Y1 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDH20Q8N6Y1 AC011558.1-201ENST00000623459 338 ntBASIC19.03■□□□□ 0.64
PCDH20Q8N6Y1 AL023973.1-201ENST00000624619 620 ntBASIC19.03■□□□□ 0.64
PCDH20Q8N6Y1 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
PCDH20Q8N6Y1 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDH20Q8N6Y1 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
PCDH20Q8N6Y1 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDH20Q8N6Y1 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
PCDH20Q8N6Y1 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDH20Q8N6Y1 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDH20Q8N6Y1 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDH20Q8N6Y1 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDH20Q8N6Y1 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDH20Q8N6Y1 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
PCDH20Q8N6Y1 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.03■□□□□ 0.64
PCDH20Q8N6Y1 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDH20Q8N6Y1 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDH20Q8N6Y1 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCDH20Q8N6Y1 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.02■□□□□ 0.64
PCDH20Q8N6Y1 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.02■□□□□ 0.64
PCDH20Q8N6Y1 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDH20Q8N6Y1 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDH20Q8N6Y1 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCDH20Q8N6Y1 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDH20Q8N6Y1 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDH20Q8N6Y1 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.02■□□□□ 0.64
PCDH20Q8N6Y1 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.02■□□□□ 0.64
PCDH20Q8N6Y1 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCDH20Q8N6Y1 AC022616.7-201ENST00000525383 220 ntBASIC19.02■□□□□ 0.64
PCDH20Q8N6Y1 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.02■□□□□ 0.64
PCDH20Q8N6Y1 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCDH20Q8N6Y1 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
PCDH20Q8N6Y1 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCDH20Q8N6Y1 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.02■□□□□ 0.64
PCDH20Q8N6Y1 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDH20Q8N6Y1 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDH20Q8N6Y1 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
PCDH20Q8N6Y1 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
PCDH20Q8N6Y1 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.02■□□□□ 0.63
PCDH20Q8N6Y1 AL161938.1-201ENST00000569833 2180 ntBASIC19.02■□□□□ 0.63
PCDH20Q8N6Y1 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
PCDH20Q8N6Y1 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
PCDH20Q8N6Y1 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
PCDH20Q8N6Y1 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDH20Q8N6Y1 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDH20Q8N6Y1 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDH20Q8N6Y1 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDH20Q8N6Y1 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDH20Q8N6Y1 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.01■□□□□ 0.63
PCDH20Q8N6Y1 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.01■□□□□ 0.63
PCDH20Q8N6Y1 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.01■□□□□ 0.63
PCDH20Q8N6Y1 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCDH20Q8N6Y1 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDH20Q8N6Y1 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDH20Q8N6Y1 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
PCDH20Q8N6Y1 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.01■□□□□ 0.63
PCDH20Q8N6Y1 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDH20Q8N6Y1 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDH20Q8N6Y1 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDH20Q8N6Y1 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDH20Q8N6Y1 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDH20Q8N6Y1 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDH20Q8N6Y1 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
PCDH20Q8N6Y1 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDH20Q8N6Y1 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDH20Q8N6Y1 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms