Protein–RNA interactions for Protein: Q8N1V2

CFAP52, Cilia- and flagella-associated protein 52, humanhuman

Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP52Q8N1V2 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CFAP52Q8N1V2 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CFAP52Q8N1V2 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.16■□□□□ 0.66
CFAP52Q8N1V2 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.16■□□□□ 0.66
CFAP52Q8N1V2 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
CFAP52Q8N1V2 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.16■□□□□ 0.66
CFAP52Q8N1V2 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CFAP52Q8N1V2 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CFAP52Q8N1V2 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.15■□□□□ 0.66
CFAP52Q8N1V2 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CFAP52Q8N1V2 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CFAP52Q8N1V2 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CFAP52Q8N1V2 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CFAP52Q8N1V2 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CFAP52Q8N1V2 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CFAP52Q8N1V2 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CFAP52Q8N1V2 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.15■□□□□ 0.66
CFAP52Q8N1V2 STARP1-201ENST00000397973 869 ntBASIC19.15■□□□□ 0.66
CFAP52Q8N1V2 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CFAP52Q8N1V2 AL671277.2-201ENST00000458060 996 ntBASIC19.15■□□□□ 0.66
CFAP52Q8N1V2 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CFAP52Q8N1V2 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CFAP52Q8N1V2 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CFAP52Q8N1V2 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CFAP52Q8N1V2 AP000974.1-201ENST00000623909 2387 ntBASIC19.15■□□□□ 0.66
CFAP52Q8N1V2 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CFAP52Q8N1V2 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.15■□□□□ 0.66
CFAP52Q8N1V2 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CFAP52Q8N1V2 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CFAP52Q8N1V2 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CFAP52Q8N1V2 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CFAP52Q8N1V2 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CFAP52Q8N1V2 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.15■□□□□ 0.66
CFAP52Q8N1V2 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CFAP52Q8N1V2 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
CFAP52Q8N1V2 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
CFAP52Q8N1V2 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
CFAP52Q8N1V2 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CFAP52Q8N1V2 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.14■□□□□ 0.66
CFAP52Q8N1V2 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CFAP52Q8N1V2 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.14■□□□□ 0.66
CFAP52Q8N1V2 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CFAP52Q8N1V2 AC099343.3-201ENST00000605834 2503 ntBASIC19.14■□□□□ 0.65
CFAP52Q8N1V2 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CFAP52Q8N1V2 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CFAP52Q8N1V2 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CFAP52Q8N1V2 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CFAP52Q8N1V2 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CFAP52Q8N1V2 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CFAP52Q8N1V2 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CFAP52Q8N1V2 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CFAP52Q8N1V2 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CFAP52Q8N1V2 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CFAP52Q8N1V2 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CFAP52Q8N1V2 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CFAP52Q8N1V2 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CFAP52Q8N1V2 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CFAP52Q8N1V2 RASA4DP-201ENST00000460726 1199 ntBASIC19.14■□□□□ 0.65
CFAP52Q8N1V2 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.14■□□□□ 0.65
CFAP52Q8N1V2 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CFAP52Q8N1V2 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
CFAP52Q8N1V2 AL157888.1-201ENST00000631930 593 ntBASIC19.14■□□□□ 0.65
CFAP52Q8N1V2 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CFAP52Q8N1V2 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CFAP52Q8N1V2 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.14■□□□□ 0.65
CFAP52Q8N1V2 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.14■□□□□ 0.65
CFAP52Q8N1V2 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CFAP52Q8N1V2 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.14■□□□□ 0.65
CFAP52Q8N1V2 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CFAP52Q8N1V2 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.13■□□□□ 0.65
CFAP52Q8N1V2 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CFAP52Q8N1V2 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CFAP52Q8N1V2 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.13■□□□□ 0.65
CFAP52Q8N1V2 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.13■□□□□ 0.65
CFAP52Q8N1V2 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
CFAP52Q8N1V2 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CFAP52Q8N1V2 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CFAP52Q8N1V2 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CFAP52Q8N1V2 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.13■□□□□ 0.65
CFAP52Q8N1V2 AC092597.1-201ENST00000487352 616 ntBASIC19.13■□□□□ 0.65
CFAP52Q8N1V2 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.13■□□□□ 0.65
CFAP52Q8N1V2 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.13■□□□□ 0.65
CFAP52Q8N1V2 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.13■□□□□ 0.65
CFAP52Q8N1V2 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.13■□□□□ 0.65
CFAP52Q8N1V2 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CFAP52Q8N1V2 HOXB1-202ENST00000577092 1414 ntBASIC19.13■□□□□ 0.65
CFAP52Q8N1V2 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.13■□□□□ 0.65
CFAP52Q8N1V2 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CFAP52Q8N1V2 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CFAP52Q8N1V2 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CFAP52Q8N1V2 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CFAP52Q8N1V2 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CFAP52Q8N1V2 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CFAP52Q8N1V2 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CFAP52Q8N1V2 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.12■□□□□ 0.65
CFAP52Q8N1V2 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CFAP52Q8N1V2 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CFAP52Q8N1V2 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CFAP52Q8N1V2 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CFAP52Q8N1V2 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms