Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.48■□□□□ 0.55
APLFQ8IW19 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.48■□□□□ 0.55
APLFQ8IW19 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
APLFQ8IW19 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
APLFQ8IW19 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
APLFQ8IW19 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.48■□□□□ 0.55
APLFQ8IW19 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.48■□□□□ 0.55
APLFQ8IW19 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
APLFQ8IW19 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.47■□□□□ 0.55
APLFQ8IW19 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
APLFQ8IW19 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
APLFQ8IW19 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
APLFQ8IW19 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
APLFQ8IW19 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
APLFQ8IW19 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
APLFQ8IW19 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.47■□□□□ 0.55
APLFQ8IW19 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
APLFQ8IW19 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
APLFQ8IW19 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.47■□□□□ 0.55
APLFQ8IW19 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
APLFQ8IW19 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
APLFQ8IW19 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
APLFQ8IW19 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.47■□□□□ 0.55
APLFQ8IW19 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.47■□□□□ 0.55
APLFQ8IW19 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
APLFQ8IW19 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.47■□□□□ 0.55
APLFQ8IW19 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.47■□□□□ 0.55
APLFQ8IW19 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.47■□□□□ 0.55
APLFQ8IW19 AC116562.2-201ENST00000507042 360 ntBASIC18.47■□□□□ 0.55
APLFQ8IW19 KRT18P35-201ENST00000510488 1269 ntBASIC18.47■□□□□ 0.55
APLFQ8IW19 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.47■□□□□ 0.55
APLFQ8IW19 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.47■□□□□ 0.55
APLFQ8IW19 AP000525.1-201ENST00000608286 694 ntBASIC18.47■□□□□ 0.55
APLFQ8IW19 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.47■□□□□ 0.55
APLFQ8IW19 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
APLFQ8IW19 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.47■□□□□ 0.55
APLFQ8IW19 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
APLFQ8IW19 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.47■□□□□ 0.55
APLFQ8IW19 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
APLFQ8IW19 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
APLFQ8IW19 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
APLFQ8IW19 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
APLFQ8IW19 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
APLFQ8IW19 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
APLFQ8IW19 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.47■□□□□ 0.55
APLFQ8IW19 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
APLFQ8IW19 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
APLFQ8IW19 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
APLFQ8IW19 WIZP1-201ENST00000531444 2299 ntBASIC18.47■□□□□ 0.55
APLFQ8IW19 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
APLFQ8IW19 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
APLFQ8IW19 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
APLFQ8IW19 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
APLFQ8IW19 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
APLFQ8IW19 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
APLFQ8IW19 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
APLFQ8IW19 AC067852.2-201ENST00000590513 2313 ntBASIC18.46■□□□□ 0.55
APLFQ8IW19 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.46■□□□□ 0.55
APLFQ8IW19 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.46■□□□□ 0.55
APLFQ8IW19 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.46■□□□□ 0.55
APLFQ8IW19 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
APLFQ8IW19 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
APLFQ8IW19 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
APLFQ8IW19 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
APLFQ8IW19 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
APLFQ8IW19 AC106820.2-201ENST00000563775 3264 ntBASIC18.46■□□□□ 0.55
APLFQ8IW19 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
APLFQ8IW19 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
APLFQ8IW19 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
APLFQ8IW19 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
APLFQ8IW19 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
APLFQ8IW19 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
APLFQ8IW19 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
APLFQ8IW19 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.46■□□□□ 0.55
APLFQ8IW19 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.46■□□□□ 0.55
APLFQ8IW19 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
APLFQ8IW19 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
APLFQ8IW19 AL049597.2-201ENST00000565575 961 ntBASIC18.46■□□□□ 0.55
APLFQ8IW19 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.46■□□□□ 0.55
APLFQ8IW19 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.46■□□□□ 0.55
APLFQ8IW19 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.46■□□□□ 0.55
APLFQ8IW19 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
APLFQ8IW19 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.46■□□□□ 0.55
APLFQ8IW19 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
APLFQ8IW19 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
APLFQ8IW19 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
APLFQ8IW19 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
APLFQ8IW19 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
APLFQ8IW19 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
APLFQ8IW19 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
APLFQ8IW19 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
APLFQ8IW19 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
APLFQ8IW19 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
APLFQ8IW19 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
APLFQ8IW19 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
APLFQ8IW19 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
APLFQ8IW19 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
APLFQ8IW19 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
APLFQ8IW19 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
APLFQ8IW19 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms