Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP1BQ7LBR1 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.2■□□□□ 0.34
CHMP1BQ7LBR1 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP1BQ7LBR1 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.2■□□□□ 0.34
CHMP1BQ7LBR1 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP1BQ7LBR1 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.2■□□□□ 0.34
CHMP1BQ7LBR1 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.2■□□□□ 0.34
CHMP1BQ7LBR1 LIN28AP1-201ENST00000429574 405 ntBASIC17.2■□□□□ 0.34
CHMP1BQ7LBR1 AC008040.2-201ENST00000461049 708 ntBASIC17.2■□□□□ 0.34
CHMP1BQ7LBR1 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.2■□□□□ 0.34
CHMP1BQ7LBR1 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CHMP1BQ7LBR1 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.2■□□□□ 0.34
CHMP1BQ7LBR1 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
CHMP1BQ7LBR1 AC145285.6-201ENST00000604632 637 ntBASIC17.2■□□□□ 0.34
CHMP1BQ7LBR1 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP1BQ7LBR1 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.2■□□□□ 0.34
CHMP1BQ7LBR1 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP1BQ7LBR1 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.2■□□□□ 0.34
CHMP1BQ7LBR1 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP1BQ7LBR1 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP1BQ7LBR1 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP1BQ7LBR1 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP1BQ7LBR1 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP1BQ7LBR1 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.2■□□□□ 0.34
CHMP1BQ7LBR1 KRT8P9-201ENST00000558927 1449 ntBASIC17.2■□□□□ 0.34
CHMP1BQ7LBR1 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP1BQ7LBR1 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP1BQ7LBR1 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP1BQ7LBR1 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.19■□□□□ 0.34
CHMP1BQ7LBR1 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.19■□□□□ 0.34
CHMP1BQ7LBR1 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP1BQ7LBR1 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP1BQ7LBR1 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.19■□□□□ 0.34
CHMP1BQ7LBR1 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
CHMP1BQ7LBR1 AC096733.2-201ENST00000609937 1394 ntBASIC17.19■□□□□ 0.34
CHMP1BQ7LBR1 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.19■□□□□ 0.34
CHMP1BQ7LBR1 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.19■□□□□ 0.34
CHMP1BQ7LBR1 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
CHMP1BQ7LBR1 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CHMP1BQ7LBR1 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.19■□□□□ 0.34
CHMP1BQ7LBR1 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CHMP1BQ7LBR1 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP1BQ7LBR1 PRSS44-201ENST00000515154 1146 ntBASIC17.19■□□□□ 0.34
CHMP1BQ7LBR1 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP1BQ7LBR1 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.19■□□□□ 0.34
CHMP1BQ7LBR1 EGLN1P1-201ENST00000531623 762 ntBASIC17.19■□□□□ 0.34
CHMP1BQ7LBR1 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.19■□□□□ 0.34
CHMP1BQ7LBR1 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CHMP1BQ7LBR1 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CHMP1BQ7LBR1 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.19■□□□□ 0.34
CHMP1BQ7LBR1 AC116562.4-202ENST00000641738 218 ntBASIC17.19■□□□□ 0.34
CHMP1BQ7LBR1 AC104417.2-201ENST00000562989 1793 ntBASIC17.19■□□□□ 0.34
CHMP1BQ7LBR1 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.19■□□□□ 0.34
CHMP1BQ7LBR1 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
CHMP1BQ7LBR1 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CHMP1BQ7LBR1 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP1BQ7LBR1 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CHMP1BQ7LBR1 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP1BQ7LBR1 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP1BQ7LBR1 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP1BQ7LBR1 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CHMP1BQ7LBR1 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CHMP1BQ7LBR1 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP1BQ7LBR1 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP1BQ7LBR1 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP1BQ7LBR1 CYP2D8P-201ENST00000433633 1490 ntBASIC17.18■□□□□ 0.34
CHMP1BQ7LBR1 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.18■□□□□ 0.34
CHMP1BQ7LBR1 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP1BQ7LBR1 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP1BQ7LBR1 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.18■□□□□ 0.34
CHMP1BQ7LBR1 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP1BQ7LBR1 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.18■□□□□ 0.34
CHMP1BQ7LBR1 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CHMP1BQ7LBR1 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CHMP1BQ7LBR1 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP1BQ7LBR1 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.18■□□□□ 0.34
CHMP1BQ7LBR1 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.18■□□□□ 0.34
CHMP1BQ7LBR1 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.18■□□□□ 0.34
CHMP1BQ7LBR1 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.18■□□□□ 0.34
CHMP1BQ7LBR1 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CHMP1BQ7LBR1 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP1BQ7LBR1 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.18■□□□□ 0.34
CHMP1BQ7LBR1 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.18■□□□□ 0.34
CHMP1BQ7LBR1 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.18■□□□□ 0.34
CHMP1BQ7LBR1 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP1BQ7LBR1 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CHMP1BQ7LBR1 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP1BQ7LBR1 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP1BQ7LBR1 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP1BQ7LBR1 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP1BQ7LBR1 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP1BQ7LBR1 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP1BQ7LBR1 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP1BQ7LBR1 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP1BQ7LBR1 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP1BQ7LBR1 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.18■□□□□ 0.34
CHMP1BQ7LBR1 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP1BQ7LBR1 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP1BQ7LBR1 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP1BQ7LBR1 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms