Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COLCA1Q6ZS62 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COLCA1Q6ZS62 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.04■□□□□ 0.16
COLCA1Q6ZS62 BICD1-207ENST00000551848 1962 ntBASIC16.04■□□□□ 0.16
COLCA1Q6ZS62 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COLCA1Q6ZS62 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
COLCA1Q6ZS62 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COLCA1Q6ZS62 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
COLCA1Q6ZS62 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COLCA1Q6ZS62 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
COLCA1Q6ZS62 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COLCA1Q6ZS62 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COLCA1Q6ZS62 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
COLCA1Q6ZS62 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
COLCA1Q6ZS62 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.04■□□□□ 0.16
COLCA1Q6ZS62 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.04■□□□□ 0.16
COLCA1Q6ZS62 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
COLCA1Q6ZS62 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
COLCA1Q6ZS62 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
COLCA1Q6ZS62 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
COLCA1Q6ZS62 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COLCA1Q6ZS62 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
COLCA1Q6ZS62 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
COLCA1Q6ZS62 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.04■□□□□ 0.16
COLCA1Q6ZS62 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COLCA1Q6ZS62 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
COLCA1Q6ZS62 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.03■□□□□ 0.16
COLCA1Q6ZS62 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
COLCA1Q6ZS62 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
COLCA1Q6ZS62 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
COLCA1Q6ZS62 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COLCA1Q6ZS62 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
COLCA1Q6ZS62 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COLCA1Q6ZS62 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.03■□□□□ 0.16
COLCA1Q6ZS62 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
COLCA1Q6ZS62 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
COLCA1Q6ZS62 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.03■□□□□ 0.16
COLCA1Q6ZS62 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.03■□□□□ 0.16
COLCA1Q6ZS62 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COLCA1Q6ZS62 HMGA1P5-201ENST00000412453 271 ntBASIC16.03■□□□□ 0.16
COLCA1Q6ZS62 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.03■□□□□ 0.16
COLCA1Q6ZS62 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.03■□□□□ 0.16
COLCA1Q6ZS62 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.03■□□□□ 0.16
COLCA1Q6ZS62 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.03■□□□□ 0.16
COLCA1Q6ZS62 AL512604.3-201ENST00000569583 964 ntBASIC16.03■□□□□ 0.16
COLCA1Q6ZS62 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.03■□□□□ 0.16
COLCA1Q6ZS62 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
COLCA1Q6ZS62 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COLCA1Q6ZS62 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
COLCA1Q6ZS62 AL162741.1-201ENST00000565563 1558 ntBASIC16.03■□□□□ 0.16
COLCA1Q6ZS62 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.03■□□□□ 0.16
COLCA1Q6ZS62 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COLCA1Q6ZS62 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
COLCA1Q6ZS62 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.03■□□□□ 0.16
COLCA1Q6ZS62 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COLCA1Q6ZS62 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
COLCA1Q6ZS62 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COLCA1Q6ZS62 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.03■□□□□ 0.16
COLCA1Q6ZS62 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
COLCA1Q6ZS62 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.02■□□□□ 0.16
COLCA1Q6ZS62 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.02■□□□□ 0.16
COLCA1Q6ZS62 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
COLCA1Q6ZS62 LINC01568-207ENST00000641790 1380 ntBASIC16.02■□□□□ 0.16
COLCA1Q6ZS62 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
COLCA1Q6ZS62 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
COLCA1Q6ZS62 AC135050.7-201ENST00000624508 2218 ntBASIC16.02■□□□□ 0.16
COLCA1Q6ZS62 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
COLCA1Q6ZS62 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.02■□□□□ 0.16
COLCA1Q6ZS62 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
COLCA1Q6ZS62 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.02■□□□□ 0.16
COLCA1Q6ZS62 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.02■□□□□ 0.16
COLCA1Q6ZS62 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
COLCA1Q6ZS62 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
COLCA1Q6ZS62 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
COLCA1Q6ZS62 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.02■□□□□ 0.16
COLCA1Q6ZS62 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.02■□□□□ 0.16
COLCA1Q6ZS62 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
COLCA1Q6ZS62 AC087499.1-201ENST00000418141 1075 ntBASIC16.02■□□□□ 0.16
COLCA1Q6ZS62 ECEL1P2-202ENST00000465689 757 ntBASIC16.02■□□□□ 0.16
COLCA1Q6ZS62 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
COLCA1Q6ZS62 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.02■□□□□ 0.16
COLCA1Q6ZS62 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
COLCA1Q6ZS62 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.02■□□□□ 0.16
COLCA1Q6ZS62 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.02■□□□□ 0.16
COLCA1Q6ZS62 AC145285.6-201ENST00000604632 637 ntBASIC16.02■□□□□ 0.16
COLCA1Q6ZS62 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
COLCA1Q6ZS62 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.02■□□□□ 0.16
COLCA1Q6ZS62 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
COLCA1Q6ZS62 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
COLCA1Q6ZS62 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.02■□□□□ 0.15
COLCA1Q6ZS62 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.02■□□□□ 0.15
COLCA1Q6ZS62 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
COLCA1Q6ZS62 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
COLCA1Q6ZS62 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
COLCA1Q6ZS62 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
COLCA1Q6ZS62 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.02■□□□□ 0.15
COLCA1Q6ZS62 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.02■□□□□ 0.15
COLCA1Q6ZS62 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
COLCA1Q6ZS62 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
COLCA1Q6ZS62 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms