Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXR1Q6PIV2 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.44■□□□□ 0.7
FOXR1Q6PIV2 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
FOXR1Q6PIV2 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.44■□□□□ 0.7
FOXR1Q6PIV2 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXR1Q6PIV2 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
FOXR1Q6PIV2 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXR1Q6PIV2 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
FOXR1Q6PIV2 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXR1Q6PIV2 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
FOXR1Q6PIV2 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.44■□□□□ 0.7
FOXR1Q6PIV2 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
FOXR1Q6PIV2 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.44■□□□□ 0.7
FOXR1Q6PIV2 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.44■□□□□ 0.7
FOXR1Q6PIV2 AC005829.2-201ENST00000571422 1056 ntBASIC19.44■□□□□ 0.7
FOXR1Q6PIV2 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.44■□□□□ 0.7
FOXR1Q6PIV2 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.44■□□□□ 0.7
FOXR1Q6PIV2 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.44■□□□□ 0.7
FOXR1Q6PIV2 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
FOXR1Q6PIV2 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXR1Q6PIV2 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.44■□□□□ 0.7
FOXR1Q6PIV2 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
FOXR1Q6PIV2 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.44■□□□□ 0.7
FOXR1Q6PIV2 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.44■□□□□ 0.7
FOXR1Q6PIV2 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
FOXR1Q6PIV2 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXR1Q6PIV2 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.44■□□□□ 0.7
FOXR1Q6PIV2 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXR1Q6PIV2 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC19.43■□□□□ 0.7
FOXR1Q6PIV2 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXR1Q6PIV2 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC19.43■□□□□ 0.7
FOXR1Q6PIV2 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXR1Q6PIV2 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXR1Q6PIV2 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXR1Q6PIV2 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXR1Q6PIV2 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXR1Q6PIV2 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXR1Q6PIV2 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
FOXR1Q6PIV2 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
FOXR1Q6PIV2 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.43■□□□□ 0.7
FOXR1Q6PIV2 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
FOXR1Q6PIV2 MIR4785-201ENST00000585005 73 ntBASIC19.43■□□□□ 0.7
FOXR1Q6PIV2 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
FOXR1Q6PIV2 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.43■□□□□ 0.7
FOXR1Q6PIV2 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
FOXR1Q6PIV2 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
FOXR1Q6PIV2 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.43■□□□□ 0.7
FOXR1Q6PIV2 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
FOXR1Q6PIV2 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.43■□□□□ 0.7
FOXR1Q6PIV2 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
FOXR1Q6PIV2 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
FOXR1Q6PIV2 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXR1Q6PIV2 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXR1Q6PIV2 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXR1Q6PIV2 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXR1Q6PIV2 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXR1Q6PIV2 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXR1Q6PIV2 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.43■□□□□ 0.7
FOXR1Q6PIV2 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXR1Q6PIV2 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.43■□□□□ 0.7
FOXR1Q6PIV2 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
FOXR1Q6PIV2 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXR1Q6PIV2 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXR1Q6PIV2 SIRPAP1-201ENST00000448467 1770 ntBASIC19.42■□□□□ 0.7
FOXR1Q6PIV2 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.42■□□□□ 0.7
FOXR1Q6PIV2 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
FOXR1Q6PIV2 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
FOXR1Q6PIV2 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXR1Q6PIV2 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
FOXR1Q6PIV2 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXR1Q6PIV2 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.42■□□□□ 0.7
FOXR1Q6PIV2 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
FOXR1Q6PIV2 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.42■□□□□ 0.7
FOXR1Q6PIV2 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
FOXR1Q6PIV2 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
FOXR1Q6PIV2 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.42■□□□□ 0.7
FOXR1Q6PIV2 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.42■□□□□ 0.7
FOXR1Q6PIV2 TSPY15P-201ENST00000457163 923 ntBASIC19.42■□□□□ 0.7
FOXR1Q6PIV2 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.42■□□□□ 0.7
FOXR1Q6PIV2 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.42■□□□□ 0.7
FOXR1Q6PIV2 AL356652.1-201ENST00000615962 565 ntBASIC19.42■□□□□ 0.7
FOXR1Q6PIV2 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.42■□□□□ 0.7
FOXR1Q6PIV2 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.42■□□□□ 0.7
FOXR1Q6PIV2 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC19.42■□□□□ 0.7
FOXR1Q6PIV2 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXR1Q6PIV2 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
FOXR1Q6PIV2 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXR1Q6PIV2 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.42■□□□□ 0.7
FOXR1Q6PIV2 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.42■□□□□ 0.7
FOXR1Q6PIV2 AL135905.2-201ENST00000584934 1404 ntBASIC19.42■□□□□ 0.7
FOXR1Q6PIV2 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
FOXR1Q6PIV2 AC141586.3-201ENST00000562166 1838 ntBASIC19.41■□□□□ 0.7
FOXR1Q6PIV2 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXR1Q6PIV2 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.41■□□□□ 0.7
FOXR1Q6PIV2 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
FOXR1Q6PIV2 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.41■□□□□ 0.7
FOXR1Q6PIV2 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
FOXR1Q6PIV2 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
FOXR1Q6PIV2 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXR1Q6PIV2 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms