Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 COBL-210ENST00000632460 1941 ntTSL 5 BASIC21.8■■□□□ 1.08
CCDC178Q5BJE1 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC178Q5BJE1 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
CCDC178Q5BJE1 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC178Q5BJE1 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC21.8■■□□□ 1.08
CCDC178Q5BJE1 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
CCDC178Q5BJE1 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC21.8■■□□□ 1.08
CCDC178Q5BJE1 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC21.8■■□□□ 1.08
CCDC178Q5BJE1 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC21.8■■□□□ 1.08
CCDC178Q5BJE1 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC21.8■■□□□ 1.08
CCDC178Q5BJE1 MIR3917-201ENST00000580971 93 ntBASIC21.8■■□□□ 1.08
CCDC178Q5BJE1 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC178Q5BJE1 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC178Q5BJE1 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CCDC178Q5BJE1 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC178Q5BJE1 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC21.8■■□□□ 1.08
CCDC178Q5BJE1 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.8■■□□□ 1.08
CCDC178Q5BJE1 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC21.79■■□□□ 1.08
CCDC178Q5BJE1 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC178Q5BJE1 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC21.79■■□□□ 1.08
CCDC178Q5BJE1 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC178Q5BJE1 SAPCD2P2-201ENST00000431719 1174 ntBASIC21.79■■□□□ 1.08
CCDC178Q5BJE1 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC21.79■■□□□ 1.08
CCDC178Q5BJE1 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC21.79■■□□□ 1.08
CCDC178Q5BJE1 AC010240.3-201ENST00000607688 395 ntBASIC21.79■■□□□ 1.08
CCDC178Q5BJE1 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC21.79■■□□□ 1.08
CCDC178Q5BJE1 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
CCDC178Q5BJE1 SNAI3-AS1-205ENST00000568633 2096 ntBASIC21.79■■□□□ 1.08
CCDC178Q5BJE1 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
CCDC178Q5BJE1 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CCDC178Q5BJE1 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC178Q5BJE1 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC178Q5BJE1 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC178Q5BJE1 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC21.78■■□□□ 1.08
CCDC178Q5BJE1 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC178Q5BJE1 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC178Q5BJE1 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC178Q5BJE1 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC178Q5BJE1 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
CCDC178Q5BJE1 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC178Q5BJE1 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC178Q5BJE1 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC178Q5BJE1 SNX5-210ENST00000481323 562 ntTSL 3 BASIC21.78■■□□□ 1.08
CCDC178Q5BJE1 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC21.78■■□□□ 1.08
CCDC178Q5BJE1 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC178Q5BJE1 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC178Q5BJE1 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC178Q5BJE1 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC178Q5BJE1 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC178Q5BJE1 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC21.77■■□□□ 1.08
CCDC178Q5BJE1 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC178Q5BJE1 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC21.77■■□□□ 1.08
CCDC178Q5BJE1 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC178Q5BJE1 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC178Q5BJE1 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC178Q5BJE1 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC178Q5BJE1 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC21.77■■□□□ 1.08
CCDC178Q5BJE1 RASA4DP-201ENST00000460726 1199 ntBASIC21.77■■□□□ 1.08
CCDC178Q5BJE1 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC178Q5BJE1 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC178Q5BJE1 RMI2-205ENST00000576027 818 ntTSL 2 BASIC21.77■■□□□ 1.08
CCDC178Q5BJE1 NTF6B-201ENST00000591913 560 ntBASIC21.77■■□□□ 1.08
CCDC178Q5BJE1 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC21.77■■□□□ 1.08
CCDC178Q5BJE1 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC178Q5BJE1 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC21.77■■□□□ 1.08
CCDC178Q5BJE1 KRT8P50-201ENST00000562022 1438 ntBASIC21.77■■□□□ 1.08
CCDC178Q5BJE1 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
CCDC178Q5BJE1 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC178Q5BJE1 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC21.77■■□□□ 1.08
CCDC178Q5BJE1 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
CCDC178Q5BJE1 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
CCDC178Q5BJE1 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC21.76■■□□□ 1.07
CCDC178Q5BJE1 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC21.76■■□□□ 1.07
CCDC178Q5BJE1 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC21.76■■□□□ 1.07
CCDC178Q5BJE1 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC178Q5BJE1 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
CCDC178Q5BJE1 GUK1-204ENST00000366721 689 ntTSL 3 BASIC21.76■■□□□ 1.07
CCDC178Q5BJE1 NAT14-202ENST00000587400 416 ntTSL 5 BASIC21.76■■□□□ 1.07
CCDC178Q5BJE1 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC21.76■■□□□ 1.07
CCDC178Q5BJE1 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC178Q5BJE1 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC178Q5BJE1 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC21.76■■□□□ 1.07
CCDC178Q5BJE1 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC21.76■■□□□ 1.07
CCDC178Q5BJE1 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
CCDC178Q5BJE1 MED25-212ENST00000618715 1467 ntTSL 5 BASIC21.76■■□□□ 1.07
CCDC178Q5BJE1 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC21.76■■□□□ 1.07
CCDC178Q5BJE1 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC178Q5BJE1 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC178Q5BJE1 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC21.75■■□□□ 1.07
CCDC178Q5BJE1 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC21.75■■□□□ 1.07
CCDC178Q5BJE1 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC178Q5BJE1 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC178Q5BJE1 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC178Q5BJE1 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC178Q5BJE1 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC21.75■■□□□ 1.07
CCDC178Q5BJE1 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
CCDC178Q5BJE1 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC21.75■■□□□ 1.07
CCDC178Q5BJE1 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC21.75■■□□□ 1.07
CCDC178Q5BJE1 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC178Q5BJE1 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms