Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 AC124864.1-201ENST00000623408 392 ntBASIC20.33■□□□□ 0.85
TRIM71Q2Q1W2 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRIM71Q2Q1W2 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TRIM71Q2Q1W2 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
TRIM71Q2Q1W2 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.32■□□□□ 0.84
TRIM71Q2Q1W2 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM71Q2Q1W2 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC20.32■□□□□ 0.84
TRIM71Q2Q1W2 KRT89P-201ENST00000620027 1478 ntBASIC20.32■□□□□ 0.84
TRIM71Q2Q1W2 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.32■□□□□ 0.84
TRIM71Q2Q1W2 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM71Q2Q1W2 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM71Q2Q1W2 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM71Q2Q1W2 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC20.32■□□□□ 0.84
TRIM71Q2Q1W2 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
TRIM71Q2Q1W2 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM71Q2Q1W2 MRPL3P1-201ENST00000400109 1033 ntBASIC20.32■□□□□ 0.84
TRIM71Q2Q1W2 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC20.32■□□□□ 0.84
TRIM71Q2Q1W2 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM71Q2Q1W2 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.32■□□□□ 0.84
TRIM71Q2Q1W2 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.32■□□□□ 0.84
TRIM71Q2Q1W2 FICD-205ENST00000552758 603 ntTSL 2 BASIC20.32■□□□□ 0.84
TRIM71Q2Q1W2 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC20.32■□□□□ 0.84
TRIM71Q2Q1W2 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.32■□□□□ 0.84
TRIM71Q2Q1W2 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC20.32■□□□□ 0.84
TRIM71Q2Q1W2 VPS51-217ENST00000639871 243 ntTSL 5 BASIC20.32■□□□□ 0.84
TRIM71Q2Q1W2 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM71Q2Q1W2 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM71Q2Q1W2 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM71Q2Q1W2 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM71Q2Q1W2 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC20.32■□□□□ 0.84
TRIM71Q2Q1W2 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.32■□□□□ 0.84
TRIM71Q2Q1W2 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM71Q2Q1W2 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM71Q2Q1W2 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM71Q2Q1W2 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM71Q2Q1W2 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM71Q2Q1W2 Z98044.1-201ENST00000632503 1764 ntBASIC20.31■□□□□ 0.84
TRIM71Q2Q1W2 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM71Q2Q1W2 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM71Q2Q1W2 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM71Q2Q1W2 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM71Q2Q1W2 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM71Q2Q1W2 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.31■□□□□ 0.84
TRIM71Q2Q1W2 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM71Q2Q1W2 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM71Q2Q1W2 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM71Q2Q1W2 KRT8P50-201ENST00000562022 1438 ntBASIC20.31■□□□□ 0.84
TRIM71Q2Q1W2 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM71Q2Q1W2 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM71Q2Q1W2 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
TRIM71Q2Q1W2 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC20.31■□□□□ 0.84
TRIM71Q2Q1W2 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC20.31■□□□□ 0.84
TRIM71Q2Q1W2 GUSBP12-201ENST00000513727 720 ntBASIC20.31■□□□□ 0.84
TRIM71Q2Q1W2 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM71Q2Q1W2 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM71Q2Q1W2 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
TRIM71Q2Q1W2 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.31■□□□□ 0.84
TRIM71Q2Q1W2 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM71Q2Q1W2 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM71Q2Q1W2 NSUN5P1-202ENST00000421140 1535 ntBASIC20.31■□□□□ 0.84
TRIM71Q2Q1W2 NSUN5P2-203ENST00000457352 1529 ntBASIC20.31■□□□□ 0.84
TRIM71Q2Q1W2 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM71Q2Q1W2 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM71Q2Q1W2 AL353692.3-201ENST00000407031 1396 ntBASIC20.31■□□□□ 0.84
TRIM71Q2Q1W2 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM71Q2Q1W2 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.3■□□□□ 0.84
TRIM71Q2Q1W2 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM71Q2Q1W2 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM71Q2Q1W2 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM71Q2Q1W2 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM71Q2Q1W2 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC20.3■□□□□ 0.84
TRIM71Q2Q1W2 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
TRIM71Q2Q1W2 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
TRIM71Q2Q1W2 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM71Q2Q1W2 AL022342.1-201ENST00000400363 863 ntBASIC20.3■□□□□ 0.84
TRIM71Q2Q1W2 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
TRIM71Q2Q1W2 CDV3-207ENST00000508481 661 ntTSL 3 BASIC20.3■□□□□ 0.84
TRIM71Q2Q1W2 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM71Q2Q1W2 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM71Q2Q1W2 CCNC-219ENST00000627680 896 ntTSL 5 BASIC20.3■□□□□ 0.84
TRIM71Q2Q1W2 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC20.3■□□□□ 0.84
TRIM71Q2Q1W2 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.3■□□□□ 0.84
TRIM71Q2Q1W2 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC20.3■□□□□ 0.84
TRIM71Q2Q1W2 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM71Q2Q1W2 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM71Q2Q1W2 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM71Q2Q1W2 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC20.3■□□□□ 0.84
TRIM71Q2Q1W2 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM71Q2Q1W2 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM71Q2Q1W2 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.29■□□□□ 0.84
TRIM71Q2Q1W2 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM71Q2Q1W2 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.29■□□□□ 0.84
TRIM71Q2Q1W2 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.29■□□□□ 0.84
TRIM71Q2Q1W2 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM71Q2Q1W2 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM71Q2Q1W2 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM71Q2Q1W2 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.29■□□□□ 0.84
TRIM71Q2Q1W2 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM71Q2Q1W2 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM71Q2Q1W2 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms