Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
YBX1P67809 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
YBX1P67809 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
YBX1P67809 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.19■□□□□ 0.5
YBX1P67809 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
YBX1P67809 KRT8P3-201ENST00000519669 1449 ntBASIC18.19■□□□□ 0.5
YBX1P67809 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
YBX1P67809 AP003041.3-201ENST00000527151 707 ntBASIC18.19■□□□□ 0.5
YBX1P67809 EGLN1P1-201ENST00000531623 762 ntBASIC18.19■□□□□ 0.5
YBX1P67809 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.19■□□□□ 0.5
YBX1P67809 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
YBX1P67809 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.19■□□□□ 0.5
YBX1P67809 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
YBX1P67809 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
YBX1P67809 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
YBX1P67809 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
YBX1P67809 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
YBX1P67809 NOC2LP1-202ENST00000452600 2235 ntBASIC18.19■□□□□ 0.5
YBX1P67809 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
YBX1P67809 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.19■□□□□ 0.5
YBX1P67809 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
YBX1P67809 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
YBX1P67809 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
YBX1P67809 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
YBX1P67809 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.19■□□□□ 0.5
YBX1P67809 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
YBX1P67809 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
YBX1P67809 GPAT2P1-201ENST00000444924 1672 ntBASIC18.18■□□□□ 0.5
YBX1P67809 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.18■□□□□ 0.5
YBX1P67809 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
YBX1P67809 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
YBX1P67809 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
YBX1P67809 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.18■□□□□ 0.5
YBX1P67809 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
YBX1P67809 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
YBX1P67809 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
YBX1P67809 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
YBX1P67809 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
YBX1P67809 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
YBX1P67809 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
YBX1P67809 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
YBX1P67809 SLC25A1P2-201ENST00000430693 912 ntBASIC18.18■□□□□ 0.5
YBX1P67809 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.18■□□□□ 0.5
YBX1P67809 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.18■□□□□ 0.5
YBX1P67809 AL353719.1-201ENST00000566847 864 ntBASIC18.18■□□□□ 0.5
YBX1P67809 AC145285.6-201ENST00000604632 637 ntBASIC18.18■□□□□ 0.5
YBX1P67809 FAM87A-204ENST00000613235 858 ntBASIC18.18■□□□□ 0.5
YBX1P67809 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
YBX1P67809 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
YBX1P67809 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
YBX1P67809 AC097493.4-201ENST00000641197 219 ntBASIC18.18■□□□□ 0.5
YBX1P67809 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
YBX1P67809 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
YBX1P67809 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.18■□□□□ 0.5
YBX1P67809 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
YBX1P67809 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
YBX1P67809 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.18■□□□□ 0.5
YBX1P67809 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
YBX1P67809 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
YBX1P67809 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
YBX1P67809 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
YBX1P67809 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
YBX1P67809 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.18■□□□□ 0.5
YBX1P67809 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.18■□□□□ 0.5
YBX1P67809 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.18■□□□□ 0.5
YBX1P67809 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.17■□□□□ 0.5
YBX1P67809 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
YBX1P67809 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.17■□□□□ 0.5
YBX1P67809 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.17■□□□□ 0.5
YBX1P67809 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.17■□□□□ 0.5
YBX1P67809 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.17■□□□□ 0.5
YBX1P67809 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
YBX1P67809 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
YBX1P67809 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.17■□□□□ 0.5
YBX1P67809 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
YBX1P67809 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
YBX1P67809 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
YBX1P67809 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
YBX1P67809 CA15P1-201ENST00000481698 905 ntBASIC18.17■□□□□ 0.5
YBX1P67809 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.17■□□□□ 0.5
YBX1P67809 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.17■□□□□ 0.5
YBX1P67809 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
YBX1P67809 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
YBX1P67809 AC067852.2-201ENST00000590513 2313 ntBASIC18.17■□□□□ 0.5
YBX1P67809 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
YBX1P67809 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
YBX1P67809 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
YBX1P67809 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.16■□□□□ 0.5
YBX1P67809 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.16■□□□□ 0.5
YBX1P67809 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
YBX1P67809 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.16■□□□□ 0.5
YBX1P67809 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
YBX1P67809 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.16■□□□□ 0.5
YBX1P67809 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
YBX1P67809 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
YBX1P67809 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.16■□□□□ 0.5
YBX1P67809 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
YBX1P67809 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
YBX1P67809 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
YBX1P67809 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms