Protein–RNA interactions for Protein: P62304

SNRPE, Small nuclear ribonucleoprotein E, humanhuman

Known RBP Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPEP62304 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
SNRPEP62304 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNRPEP62304 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC14.35□□□□□ -0.11
SNRPEP62304 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNRPEP62304 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNRPEP62304 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNRPEP62304 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNRPEP62304 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNRPEP62304 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SNRPEP62304 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SNRPEP62304 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC14.35□□□□□ -0.11
SNRPEP62304 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
SNRPEP62304 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.35□□□□□ -0.11
SNRPEP62304 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNRPEP62304 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNRPEP62304 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SNRPEP62304 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNRPEP62304 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SNRPEP62304 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNRPEP62304 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
SNRPEP62304 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
SNRPEP62304 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
SNRPEP62304 AC026691.1-201ENST00000602502 2017 ntBASIC14.34□□□□□ -0.11
SNRPEP62304 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNRPEP62304 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
SNRPEP62304 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SNRPEP62304 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNRPEP62304 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SNRPEP62304 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
SNRPEP62304 AGGF1P2-201ENST00000426656 2106 ntBASIC14.34□□□□□ -0.11
SNRPEP62304 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC14.34□□□□□ -0.11
SNRPEP62304 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.34□□□□□ -0.11
SNRPEP62304 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
SNRPEP62304 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNRPEP62304 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNRPEP62304 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SNRPEP62304 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SNRPEP62304 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SNRPEP62304 AC063926.3-201ENST00000624734 5658 ntBASIC14.34□□□□□ -0.11
SNRPEP62304 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SNRPEP62304 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNRPEP62304 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNRPEP62304 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
SNRPEP62304 AC106886.4-201ENST00000623557 2502 ntBASIC14.34□□□□□ -0.11
SNRPEP62304 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SNRPEP62304 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNRPEP62304 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SNRPEP62304 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SNRPEP62304 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SNRPEP62304 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SNRPEP62304 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SNRPEP62304 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SNRPEP62304 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SNRPEP62304 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.11
SNRPEP62304 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SNRPEP62304 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SNRPEP62304 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SNRPEP62304 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SNRPEP62304 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SNRPEP62304 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.33□□□□□ -0.12
SNRPEP62304 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.33□□□□□ -0.12
SNRPEP62304 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SNRPEP62304 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SNRPEP62304 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SNRPEP62304 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SNRPEP62304 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SNRPEP62304 AC022616.5-201ENST00000518796 181 ntBASIC14.33□□□□□ -0.12
SNRPEP62304 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
SNRPEP62304 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC14.33□□□□□ -0.12
SNRPEP62304 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SNRPEP62304 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SNRPEP62304 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SNRPEP62304 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
SNRPEP62304 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.33□□□□□ -0.12
SNRPEP62304 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC14.33□□□□□ -0.12
SNRPEP62304 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SNRPEP62304 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SNRPEP62304 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SNRPEP62304 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SNRPEP62304 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.33□□□□□ -0.12
SNRPEP62304 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC14.32□□□□□ -0.12
SNRPEP62304 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNRPEP62304 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SNRPEP62304 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.32□□□□□ -0.12
SNRPEP62304 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SNRPEP62304 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNRPEP62304 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNRPEP62304 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SNRPEP62304 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNRPEP62304 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNRPEP62304 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SNRPEP62304 AC105917.1-201ENST00000506637 2539 ntBASIC14.32□□□□□ -0.12
SNRPEP62304 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SNRPEP62304 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNRPEP62304 MLEC-202ENST00000412616 841 ntTSL 3 BASIC14.32□□□□□ -0.12
SNRPEP62304 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
SNRPEP62304 AC010141.3-201ENST00000456659 717 ntBASIC14.32□□□□□ -0.12
SNRPEP62304 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SNRPEP62304 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNRPEP62304 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms