Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CXCR4P61073 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.01■□□□□ 0.31
CXCR4P61073 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CXCR4P61073 MTMR9LP-203ENST00000426597 1545 ntBASIC17.01■□□□□ 0.31
CXCR4P61073 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CXCR4P61073 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CXCR4P61073 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CXCR4P61073 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.01■□□□□ 0.31
CXCR4P61073 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CXCR4P61073 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CXCR4P61073 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17■□□□□ 0.31
CXCR4P61073 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CXCR4P61073 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CXCR4P61073 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CXCR4P61073 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CXCR4P61073 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CXCR4P61073 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CXCR4P61073 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CXCR4P61073 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17■□□□□ 0.31
CXCR4P61073 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17■□□□□ 0.31
CXCR4P61073 CROCCP5-201ENST00000436658 830 ntBASIC17■□□□□ 0.31
CXCR4P61073 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CXCR4P61073 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17■□□□□ 0.31
CXCR4P61073 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17■□□□□ 0.31
CXCR4P61073 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17■□□□□ 0.31
CXCR4P61073 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CXCR4P61073 AC092118.2-201ENST00000613495 667 ntBASIC17■□□□□ 0.31
CXCR4P61073 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17■□□□□ 0.31
CXCR4P61073 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CXCR4P61073 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CXCR4P61073 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17■□□□□ 0.31
CXCR4P61073 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17■□□□□ 0.31
CXCR4P61073 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17■□□□□ 0.31
CXCR4P61073 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17■□□□□ 0.31
CXCR4P61073 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17■□□□□ 0.31
CXCR4P61073 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
CXCR4P61073 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CXCR4P61073 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CXCR4P61073 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CXCR4P61073 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CXCR4P61073 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.99■□□□□ 0.31
CXCR4P61073 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.99■□□□□ 0.31
CXCR4P61073 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CXCR4P61073 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CXCR4P61073 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
CXCR4P61073 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CXCR4P61073 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CXCR4P61073 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.99■□□□□ 0.31
CXCR4P61073 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.99■□□□□ 0.31
CXCR4P61073 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CXCR4P61073 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CXCR4P61073 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.99■□□□□ 0.31
CXCR4P61073 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
CXCR4P61073 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CXCR4P61073 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC16.99■□□□□ 0.31
CXCR4P61073 KRT18P16-201ENST00000510337 1294 ntBASIC16.99■□□□□ 0.31
CXCR4P61073 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CXCR4P61073 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC16.99■□□□□ 0.31
CXCR4P61073 AL121832.2-201ENST00000610979 668 ntBASIC16.99■□□□□ 0.31
CXCR4P61073 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
CXCR4P61073 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
CXCR4P61073 AC108860.2-201ENST00000562760 2183 ntBASIC16.99■□□□□ 0.31
CXCR4P61073 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CXCR4P61073 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CXCR4P61073 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CXCR4P61073 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CXCR4P61073 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CXCR4P61073 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CXCR4P61073 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CXCR4P61073 AC092368.3-202ENST00000574180 1591 ntBASIC16.98■□□□□ 0.31
CXCR4P61073 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CXCR4P61073 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
CXCR4P61073 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CXCR4P61073 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CXCR4P61073 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CXCR4P61073 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC16.98■□□□□ 0.31
CXCR4P61073 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC16.98■□□□□ 0.31
CXCR4P61073 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CXCR4P61073 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CXCR4P61073 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CXCR4P61073 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CXCR4P61073 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CXCR4P61073 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CXCR4P61073 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CXCR4P61073 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC16.98■□□□□ 0.31
CXCR4P61073 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.98■□□□□ 0.31
CXCR4P61073 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.98■□□□□ 0.31
CXCR4P61073 AC083906.2-201ENST00000511578 360 ntBASIC16.98■□□□□ 0.31
CXCR4P61073 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
CXCR4P61073 BET1L-207ENST00000529614 560 ntTSL 5 BASIC16.98■□□□□ 0.31
CXCR4P61073 PNN-205ENST00000556530 601 ntTSL 2 BASIC16.98■□□□□ 0.31
CXCR4P61073 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.98■□□□□ 0.31
CXCR4P61073 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CXCR4P61073 AL137784.2-201ENST00000607332 1000 ntBASIC16.98■□□□□ 0.31
CXCR4P61073 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.98■□□□□ 0.31
CXCR4P61073 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.98■□□□□ 0.31
CXCR4P61073 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CXCR4P61073 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CXCR4P61073 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CXCR4P61073 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms