Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 MIR638-201ENST00000385237 100 ntBASIC13.05□□□□□ -0.32
CKS1BP61024 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CKS1BP61024 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC13.05□□□□□ -0.32
CKS1BP61024 LGR4-203ENST00000480977 492 ntTSL 2 BASIC13.05□□□□□ -0.32
CKS1BP61024 RARRES2P4-201ENST00000514074 484 ntBASIC13.05□□□□□ -0.32
CKS1BP61024 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC13.05□□□□□ -0.32
CKS1BP61024 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC13.05□□□□□ -0.32
CKS1BP61024 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC13.05□□□□□ -0.32
CKS1BP61024 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC13.05□□□□□ -0.32
CKS1BP61024 AC069236.1-201ENST00000604339 616 ntBASIC13.05□□□□□ -0.32
CKS1BP61024 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CKS1BP61024 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CKS1BP61024 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC13.05□□□□□ -0.32
CKS1BP61024 AC126755.1-201ENST00000525846 6405 ntBASIC13.05□□□□□ -0.32
CKS1BP61024 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
CKS1BP61024 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
CKS1BP61024 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
CKS1BP61024 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CKS1BP61024 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CKS1BP61024 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CKS1BP61024 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CKS1BP61024 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CKS1BP61024 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
CKS1BP61024 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CKS1BP61024 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CKS1BP61024 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
CKS1BP61024 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CKS1BP61024 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CKS1BP61024 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CKS1BP61024 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CKS1BP61024 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CKS1BP61024 CROCCP2-202ENST00000412962 2773 ntBASIC13.04□□□□□ -0.32
CKS1BP61024 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
CKS1BP61024 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CKS1BP61024 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
CKS1BP61024 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CKS1BP61024 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CKS1BP61024 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CKS1BP61024 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CKS1BP61024 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC13.04□□□□□ -0.32
CKS1BP61024 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CKS1BP61024 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
CKS1BP61024 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CKS1BP61024 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CKS1BP61024 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
CKS1BP61024 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CKS1BP61024 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
CKS1BP61024 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
CKS1BP61024 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.04□□□□□ -0.32
CKS1BP61024 PCDHA1-201ENST00000378133 2726 ntBASIC13.04□□□□□ -0.32
CKS1BP61024 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CKS1BP61024 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CKS1BP61024 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
CKS1BP61024 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC13.04□□□□□ -0.32
CKS1BP61024 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CKS1BP61024 BET1L-204ENST00000410108 637 ntTSL 3 BASIC13.04□□□□□ -0.32
CKS1BP61024 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CKS1BP61024 SPI1-203ENST00000533030 661 ntTSL 2 BASIC13.04□□□□□ -0.32
CKS1BP61024 DBI-210ENST00000542275 757 ntTSL 5 BASIC13.04□□□□□ -0.32
CKS1BP61024 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC13.04□□□□□ -0.32
CKS1BP61024 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC13.04□□□□□ -0.32
CKS1BP61024 NTF6G-201ENST00000591094 616 ntBASIC13.04□□□□□ -0.32
CKS1BP61024 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
CKS1BP61024 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CKS1BP61024 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
CKS1BP61024 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
CKS1BP61024 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CKS1BP61024 GCK-205ENST00000437084 1385 ntTSL 5 BASIC13.04□□□□□ -0.32
CKS1BP61024 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CKS1BP61024 SIRPAP1-201ENST00000448467 1770 ntBASIC13.04□□□□□ -0.32
CKS1BP61024 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CKS1BP61024 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CKS1BP61024 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CKS1BP61024 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CKS1BP61024 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CKS1BP61024 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC13.04□□□□□ -0.32
CKS1BP61024 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CKS1BP61024 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CKS1BP61024 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CKS1BP61024 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC13.04□□□□□ -0.32
CKS1BP61024 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CKS1BP61024 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
CKS1BP61024 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CKS1BP61024 MKRN4P-201ENST00000444706 1521 ntBASIC13.03□□□□□ -0.32
CKS1BP61024 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC13.03□□□□□ -0.32
CKS1BP61024 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CKS1BP61024 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC13.03□□□□□ -0.32
CKS1BP61024 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC13.03□□□□□ -0.32
CKS1BP61024 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
CKS1BP61024 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
CKS1BP61024 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CKS1BP61024 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CKS1BP61024 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CKS1BP61024 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CKS1BP61024 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CKS1BP61024 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CKS1BP61024 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CKS1BP61024 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC13.03□□□□□ -0.32
CKS1BP61024 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
CKS1BP61024 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms