Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDC42P60953 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
CDC42P60953 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDC42P60953 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDC42P60953 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
CDC42P60953 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CDC42P60953 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDC42P60953 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDC42P60953 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CDC42P60953 LINC00896-202ENST00000609602 2128 ntBASIC17.06■□□□□ 0.32
CDC42P60953 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.06■□□□□ 0.32
CDC42P60953 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDC42P60953 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDC42P60953 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDC42P60953 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDC42P60953 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDC42P60953 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.06■□□□□ 0.32
CDC42P60953 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDC42P60953 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDC42P60953 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDC42P60953 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.06■□□□□ 0.32
CDC42P60953 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDC42P60953 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDC42P60953 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDC42P60953 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.06■□□□□ 0.32
CDC42P60953 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDC42P60953 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CDC42P60953 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDC42P60953 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.06■□□□□ 0.32
CDC42P60953 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.06■□□□□ 0.32
CDC42P60953 SLC25A6P5-201ENST00000435663 894 ntBASIC17.06■□□□□ 0.32
CDC42P60953 AL162430.1-201ENST00000480705 870 ntBASIC17.06■□□□□ 0.32
CDC42P60953 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.06■□□□□ 0.32
CDC42P60953 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDC42P60953 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.06■□□□□ 0.32
CDC42P60953 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDC42P60953 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.06■□□□□ 0.32
CDC42P60953 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.06■□□□□ 0.32
CDC42P60953 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDC42P60953 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDC42P60953 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDC42P60953 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDC42P60953 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDC42P60953 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.05■□□□□ 0.32
CDC42P60953 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.05■□□□□ 0.32
CDC42P60953 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDC42P60953 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDC42P60953 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CDC42P60953 AL499627.1-201ENST00000569373 2188 ntBASIC17.05■□□□□ 0.32
CDC42P60953 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDC42P60953 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDC42P60953 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDC42P60953 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDC42P60953 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CDC42P60953 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDC42P60953 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC17.05■□□□□ 0.32
CDC42P60953 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CDC42P60953 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDC42P60953 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.05■□□□□ 0.32
CDC42P60953 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.05■□□□□ 0.32
CDC42P60953 AL160286.2-201ENST00000567150 934 ntBASIC17.05■□□□□ 0.32
CDC42P60953 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
CDC42P60953 AL121829.2-201ENST00000620908 328 ntBASIC17.05■□□□□ 0.32
CDC42P60953 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.05■□□□□ 0.32
CDC42P60953 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.05■□□□□ 0.32
CDC42P60953 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDC42P60953 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDC42P60953 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.05■□□□□ 0.32
CDC42P60953 RCC2P6-201ENST00000526625 1557 ntBASIC17.05■□□□□ 0.32
CDC42P60953 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.05■□□□□ 0.32
CDC42P60953 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDC42P60953 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDC42P60953 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDC42P60953 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDC42P60953 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CDC42P60953 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.04■□□□□ 0.32
CDC42P60953 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDC42P60953 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDC42P60953 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CDC42P60953 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDC42P60953 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.04■□□□□ 0.32
CDC42P60953 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
CDC42P60953 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDC42P60953 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.04■□□□□ 0.32
CDC42P60953 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDC42P60953 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.04■□□□□ 0.32
CDC42P60953 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.04■□□□□ 0.32
CDC42P60953 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.04■□□□□ 0.32
CDC42P60953 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDC42P60953 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDC42P60953 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDC42P60953 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDC42P60953 MTMR9LP-203ENST00000426597 1545 ntBASIC17.04■□□□□ 0.32
CDC42P60953 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDC42P60953 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDC42P60953 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDC42P60953 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDC42P60953 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CDC42P60953 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CDC42P60953 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms