Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PEX3P56589 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PEX3P56589 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PEX3P56589 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
PEX3P56589 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC20.53■□□□□ 0.88
PEX3P56589 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.53■□□□□ 0.88
PEX3P56589 TSPY5P-201ENST00000426936 936 ntBASIC20.53■□□□□ 0.88
PEX3P56589 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.53■□□□□ 0.88
PEX3P56589 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC20.53■□□□□ 0.88
PEX3P56589 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PEX3P56589 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PEX3P56589 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.53■□□□□ 0.88
PEX3P56589 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PEX3P56589 AL031598.1-201ENST00000561511 1773 ntBASIC20.53■□□□□ 0.88
PEX3P56589 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
PEX3P56589 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.53■□□□□ 0.88
PEX3P56589 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.53■□□□□ 0.88
PEX3P56589 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PEX3P56589 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PEX3P56589 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.53■□□□□ 0.88
PEX3P56589 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
PEX3P56589 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
PEX3P56589 ANO7L1-203ENST00000602586 1720 ntBASIC20.53■□□□□ 0.88
PEX3P56589 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.53■□□□□ 0.88
PEX3P56589 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.53■□□□□ 0.88
PEX3P56589 HOXB1-202ENST00000577092 1414 ntBASIC20.53■□□□□ 0.88
PEX3P56589 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PEX3P56589 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PEX3P56589 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.52■□□□□ 0.88
PEX3P56589 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
PEX3P56589 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
PEX3P56589 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
PEX3P56589 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.52■□□□□ 0.88
PEX3P56589 AL049597.2-201ENST00000565575 961 ntBASIC20.52■□□□□ 0.88
PEX3P56589 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.52■□□□□ 0.88
PEX3P56589 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PEX3P56589 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.52■□□□□ 0.88
PEX3P56589 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PEX3P56589 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PEX3P56589 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PEX3P56589 AC093503.3-201ENST00000624917 2352 ntBASIC20.52■□□□□ 0.88
PEX3P56589 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.52■□□□□ 0.87
PEX3P56589 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
PEX3P56589 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
PEX3P56589 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
PEX3P56589 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PEX3P56589 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.51■□□□□ 0.87
PEX3P56589 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PEX3P56589 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PEX3P56589 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PEX3P56589 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PEX3P56589 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PEX3P56589 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.51■□□□□ 0.87
PEX3P56589 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PEX3P56589 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC20.51■□□□□ 0.87
PEX3P56589 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PEX3P56589 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PEX3P56589 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.51■□□□□ 0.87
PEX3P56589 SEC1P-202ENST00000473944 940 ntBASIC20.51■□□□□ 0.87
PEX3P56589 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.51■□□□□ 0.87
PEX3P56589 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.51■□□□□ 0.87
PEX3P56589 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
PEX3P56589 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
PEX3P56589 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
PEX3P56589 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PEX3P56589 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PEX3P56589 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.51■□□□□ 0.87
PEX3P56589 KRT8P7-201ENST00000533003 1432 ntBASIC20.51■□□□□ 0.87
PEX3P56589 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PEX3P56589 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
PEX3P56589 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
PEX3P56589 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PEX3P56589 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
PEX3P56589 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
PEX3P56589 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PEX3P56589 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
PEX3P56589 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PEX3P56589 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
PEX3P56589 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.5■□□□□ 0.87
PEX3P56589 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.5■□□□□ 0.87
PEX3P56589 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.5■□□□□ 0.87
PEX3P56589 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PEX3P56589 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
PEX3P56589 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PEX3P56589 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PEX3P56589 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
PEX3P56589 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
PEX3P56589 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PEX3P56589 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PEX3P56589 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PEX3P56589 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PEX3P56589 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PEX3P56589 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC20.5■□□□□ 0.87
PEX3P56589 AC063952.2-201ENST00000498792 1227 ntBASIC20.5■□□□□ 0.87
PEX3P56589 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC20.5■□□□□ 0.87
PEX3P56589 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
PEX3P56589 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.5■□□□□ 0.87
PEX3P56589 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PEX3P56589 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PEX3P56589 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms