Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 MIR4674-201ENST00000582457 87 ntBASIC20.54■□□□□ 0.88
PMS1P54277 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.54■□□□□ 0.88
PMS1P54277 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PMS1P54277 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PMS1P54277 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PMS1P54277 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PMS1P54277 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
PMS1P54277 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
PMS1P54277 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.54■□□□□ 0.88
PMS1P54277 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PMS1P54277 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC20.54■□□□□ 0.88
PMS1P54277 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PMS1P54277 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PMS1P54277 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PMS1P54277 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PMS1P54277 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PMS1P54277 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC20.53■□□□□ 0.88
PMS1P54277 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
PMS1P54277 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PMS1P54277 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.53■□□□□ 0.88
PMS1P54277 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PMS1P54277 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PMS1P54277 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
PMS1P54277 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.53■□□□□ 0.88
PMS1P54277 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.53■□□□□ 0.88
PMS1P54277 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.53■□□□□ 0.88
PMS1P54277 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.53■□□□□ 0.88
PMS1P54277 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PMS1P54277 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.53■□□□□ 0.88
PMS1P54277 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
PMS1P54277 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.53■□□□□ 0.88
PMS1P54277 AC026471.5-201ENST00000615068 467 ntBASIC20.53■□□□□ 0.88
PMS1P54277 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
PMS1P54277 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PMS1P54277 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
PMS1P54277 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PMS1P54277 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC20.53■□□□□ 0.88
PMS1P54277 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PMS1P54277 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PMS1P54277 AC099343.3-201ENST00000605834 2503 ntBASIC20.53■□□□□ 0.88
PMS1P54277 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PMS1P54277 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.53■□□□□ 0.88
PMS1P54277 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.53■□□□□ 0.88
PMS1P54277 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
PMS1P54277 AC112777.1-201ENST00000540175 1423 ntBASIC20.53■□□□□ 0.88
PMS1P54277 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC20.52■□□□□ 0.88
PMS1P54277 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PMS1P54277 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.52■□□□□ 0.88
PMS1P54277 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
PMS1P54277 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
PMS1P54277 AC079598.2-202ENST00000546624 1451 ntBASIC20.52■□□□□ 0.88
PMS1P54277 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PMS1P54277 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.52■□□□□ 0.88
PMS1P54277 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.52■□□□□ 0.88
PMS1P54277 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PMS1P54277 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PMS1P54277 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PMS1P54277 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.52■□□□□ 0.88
PMS1P54277 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PMS1P54277 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.52■□□□□ 0.88
PMS1P54277 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.52■□□□□ 0.88
PMS1P54277 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.52■□□□□ 0.88
PMS1P54277 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.52■□□□□ 0.88
PMS1P54277 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PMS1P54277 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
PMS1P54277 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PMS1P54277 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC20.52■□□□□ 0.88
PMS1P54277 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PMS1P54277 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PMS1P54277 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PMS1P54277 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PMS1P54277 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PMS1P54277 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PMS1P54277 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
PMS1P54277 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.51■□□□□ 0.87
PMS1P54277 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.51■□□□□ 0.87
PMS1P54277 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PMS1P54277 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
PMS1P54277 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
PMS1P54277 CD276-203ENST00000537340 2439 ntTSL 2 BASIC20.51■□□□□ 0.87
PMS1P54277 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PMS1P54277 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PMS1P54277 CRYGFP-201ENST00000418459 633 ntBASIC20.51■□□□□ 0.87
PMS1P54277 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.51■□□□□ 0.87
PMS1P54277 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.51■□□□□ 0.87
PMS1P54277 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PMS1P54277 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PMS1P54277 ESPNP-201ENST00000270691 2015 ntBASIC20.51■□□□□ 0.87
PMS1P54277 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PMS1P54277 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.5■□□□□ 0.87
PMS1P54277 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.5■□□□□ 0.87
PMS1P54277 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PMS1P54277 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.5■□□□□ 0.87
PMS1P54277 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.5■□□□□ 0.87
PMS1P54277 TSPY7P-201ENST00000431358 1114 ntBASIC20.5■□□□□ 0.87
PMS1P54277 AL355355.2-201ENST00000442321 338 ntBASIC20.5■□□□□ 0.87
PMS1P54277 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.5■□□□□ 0.87
PMS1P54277 AP003071.4-201ENST00000562276 1284 ntBASIC20.5■□□□□ 0.87
PMS1P54277 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
PMS1P54277 MYLKP1-201ENST00000509077 1580 ntBASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms