Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.82■□□□□ 0.6
LIMK2P53671 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
LIMK2P53671 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LIMK2P53671 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LIMK2P53671 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
LIMK2P53671 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LIMK2P53671 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.82■□□□□ 0.6
LIMK2P53671 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LIMK2P53671 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.81■□□□□ 0.6
LIMK2P53671 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LIMK2P53671 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LIMK2P53671 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
LIMK2P53671 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.81■□□□□ 0.6
LIMK2P53671 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LIMK2P53671 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LIMK2P53671 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LIMK2P53671 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
LIMK2P53671 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LIMK2P53671 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.81■□□□□ 0.6
LIMK2P53671 AC005521.1-201ENST00000393351 872 ntBASIC18.81■□□□□ 0.6
LIMK2P53671 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.81■□□□□ 0.6
LIMK2P53671 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.81■□□□□ 0.6
LIMK2P53671 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LIMK2P53671 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.81■□□□□ 0.6
LIMK2P53671 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.81■□□□□ 0.6
LIMK2P53671 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.81■□□□□ 0.6
LIMK2P53671 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LIMK2P53671 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.81■□□□□ 0.6
LIMK2P53671 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LIMK2P53671 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.81■□□□□ 0.6
LIMK2P53671 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LIMK2P53671 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LIMK2P53671 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
LIMK2P53671 KRT8P11-201ENST00000409686 1436 ntBASIC18.81■□□□□ 0.6
LIMK2P53671 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
LIMK2P53671 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LIMK2P53671 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.81■□□□□ 0.6
LIMK2P53671 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LIMK2P53671 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LIMK2P53671 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LIMK2P53671 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LIMK2P53671 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
LIMK2P53671 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
LIMK2P53671 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
LIMK2P53671 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LIMK2P53671 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LIMK2P53671 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.8■□□□□ 0.6
LIMK2P53671 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LIMK2P53671 MTMR9LP-203ENST00000426597 1545 ntBASIC18.8■□□□□ 0.6
LIMK2P53671 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
LIMK2P53671 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
LIMK2P53671 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
LIMK2P53671 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.8■□□□□ 0.6
LIMK2P53671 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LIMK2P53671 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LIMK2P53671 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.8■□□□□ 0.6
LIMK2P53671 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LIMK2P53671 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.8■□□□□ 0.6
LIMK2P53671 AC113347.1-201ENST00000413321 391 ntBASIC18.8■□□□□ 0.6
LIMK2P53671 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.8■□□□□ 0.6
LIMK2P53671 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.8■□□□□ 0.6
LIMK2P53671 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.8■□□□□ 0.6
LIMK2P53671 AC011506.1-201ENST00000474329 610 ntBASIC18.8■□□□□ 0.6
LIMK2P53671 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LIMK2P53671 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.8■□□□□ 0.6
LIMK2P53671 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.8■□□□□ 0.6
LIMK2P53671 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.8■□□□□ 0.6
LIMK2P53671 AC068587.9-201ENST00000641814 219 ntBASIC18.8■□□□□ 0.6
LIMK2P53671 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LIMK2P53671 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LIMK2P53671 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.8■□□□□ 0.6
LIMK2P53671 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LIMK2P53671 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LIMK2P53671 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.8■□□□□ 0.6
LIMK2P53671 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
LIMK2P53671 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.8■□□□□ 0.6
LIMK2P53671 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LIMK2P53671 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LIMK2P53671 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LIMK2P53671 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
LIMK2P53671 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
LIMK2P53671 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LIMK2P53671 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LIMK2P53671 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LIMK2P53671 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.79■□□□□ 0.6
LIMK2P53671 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
LIMK2P53671 AP005242.2-201ENST00000580065 1175 ntBASIC18.79■□□□□ 0.6
LIMK2P53671 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.79■□□□□ 0.6
LIMK2P53671 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.79■□□□□ 0.6
LIMK2P53671 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
LIMK2P53671 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LIMK2P53671 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.79■□□□□ 0.6
LIMK2P53671 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
LIMK2P53671 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
LIMK2P53671 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LIMK2P53671 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.79■□□□□ 0.6
LIMK2P53671 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.79■□□□□ 0.6
LIMK2P53671 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LIMK2P53671 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.79■□□□□ 0.6
LIMK2P53671 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms