Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.29■□□□□ 0.52
CLCNKAP51800 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLCNKAP51800 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLCNKAP51800 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
CLCNKAP51800 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CLCNKAP51800 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLCNKAP51800 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLCNKAP51800 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLCNKAP51800 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CLCNKAP51800 HEIH-201ENST00000623091 1652 ntBASIC18.28■□□□□ 0.52
CLCNKAP51800 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLCNKAP51800 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CLCNKAP51800 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
CLCNKAP51800 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.28■□□□□ 0.52
CLCNKAP51800 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLCNKAP51800 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLCNKAP51800 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.28■□□□□ 0.52
CLCNKAP51800 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLCNKAP51800 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.28■□□□□ 0.52
CLCNKAP51800 AC034232.1-201ENST00000506026 1064 ntBASIC18.28■□□□□ 0.52
CLCNKAP51800 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLCNKAP51800 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.28■□□□□ 0.52
CLCNKAP51800 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLCNKAP51800 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
CLCNKAP51800 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLCNKAP51800 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.28■□□□□ 0.52
CLCNKAP51800 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
CLCNKAP51800 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.28■□□□□ 0.52
CLCNKAP51800 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLCNKAP51800 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLCNKAP51800 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CLCNKAP51800 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLCNKAP51800 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CLCNKAP51800 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLCNKAP51800 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CLCNKAP51800 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CLCNKAP51800 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.27■□□□□ 0.52
CLCNKAP51800 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLCNKAP51800 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
CLCNKAP51800 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLCNKAP51800 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLCNKAP51800 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLCNKAP51800 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
CLCNKAP51800 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLCNKAP51800 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLCNKAP51800 AL031133.1-201ENST00000406807 723 ntBASIC18.27■□□□□ 0.52
CLCNKAP51800 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
CLCNKAP51800 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.27■□□□□ 0.52
CLCNKAP51800 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.27■□□□□ 0.52
CLCNKAP51800 SEC1P-202ENST00000473944 940 ntBASIC18.27■□□□□ 0.52
CLCNKAP51800 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.27■□□□□ 0.52
CLCNKAP51800 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLCNKAP51800 AC087388.1-201ENST00000571370 1112 ntBASIC18.27■□□□□ 0.52
CLCNKAP51800 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.27■□□□□ 0.52
CLCNKAP51800 AC083906.6-201ENST00000641366 219 ntBASIC18.27■□□□□ 0.52
CLCNKAP51800 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.27■□□□□ 0.52
CLCNKAP51800 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CLCNKAP51800 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.27■□□□□ 0.52
CLCNKAP51800 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.52
CLCNKAP51800 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
CLCNKAP51800 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CLCNKAP51800 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CLCNKAP51800 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
CLCNKAP51800 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.27■□□□□ 0.51
CLCNKAP51800 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.27■□□□□ 0.51
CLCNKAP51800 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CLCNKAP51800 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
CLCNKAP51800 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CLCNKAP51800 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.27■□□□□ 0.51
CLCNKAP51800 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CLCNKAP51800 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
CLCNKAP51800 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.26■□□□□ 0.51
CLCNKAP51800 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCNKAP51800 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLCNKAP51800 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.26■□□□□ 0.51
CLCNKAP51800 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLCNKAP51800 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CLCNKAP51800 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCNKAP51800 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCNKAP51800 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCNKAP51800 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCNKAP51800 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.26■□□□□ 0.51
CLCNKAP51800 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
CLCNKAP51800 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLCNKAP51800 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLCNKAP51800 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCNKAP51800 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.26■□□□□ 0.51
CLCNKAP51800 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CLCNKAP51800 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.26■□□□□ 0.51
CLCNKAP51800 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.26■□□□□ 0.51
CLCNKAP51800 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.26■□□□□ 0.51
CLCNKAP51800 KRT18P38-201ENST00000449496 1282 ntBASIC18.26■□□□□ 0.51
CLCNKAP51800 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCNKAP51800 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.26■□□□□ 0.51
CLCNKAP51800 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCNKAP51800 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.26■□□□□ 0.51
CLCNKAP51800 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCNKAP51800 AC034236.2-201ENST00000606662 1610 ntBASIC18.26■□□□□ 0.51
CLCNKAP51800 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCNKAP51800 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms