Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLCN4P51793 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLCN4P51793 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLCN4P51793 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.61■□□□□ 0.73
CLCN4P51793 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLCN4P51793 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLCN4P51793 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLCN4P51793 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.6■□□□□ 0.73
CLCN4P51793 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLCN4P51793 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLCN4P51793 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CLCN4P51793 AC233702.3-201ENST00000578656 1387 ntBASIC19.6■□□□□ 0.73
CLCN4P51793 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.6■□□□□ 0.73
CLCN4P51793 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLCN4P51793 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLCN4P51793 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLCN4P51793 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CLCN4P51793 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
CLCN4P51793 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLCN4P51793 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.6■□□□□ 0.73
CLCN4P51793 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.6■□□□□ 0.73
CLCN4P51793 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC19.6■□□□□ 0.73
CLCN4P51793 AC074051.2-201ENST00000565115 352 ntBASIC19.6■□□□□ 0.73
CLCN4P51793 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC19.6■□□□□ 0.73
CLCN4P51793 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLCN4P51793 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLCN4P51793 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.6■□□□□ 0.73
CLCN4P51793 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.6■□□□□ 0.73
CLCN4P51793 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.6■□□□□ 0.73
CLCN4P51793 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLCN4P51793 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.6■□□□□ 0.73
CLCN4P51793 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLCN4P51793 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.6■□□□□ 0.73
CLCN4P51793 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CLCN4P51793 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.59■□□□□ 0.73
CLCN4P51793 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLCN4P51793 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLCN4P51793 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.59■□□□□ 0.73
CLCN4P51793 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.59■□□□□ 0.73
CLCN4P51793 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.59■□□□□ 0.73
CLCN4P51793 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLCN4P51793 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLCN4P51793 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLCN4P51793 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.59■□□□□ 0.73
CLCN4P51793 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.59■□□□□ 0.73
CLCN4P51793 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLCN4P51793 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLCN4P51793 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CLCN4P51793 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
CLCN4P51793 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CLCN4P51793 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.59■□□□□ 0.73
CLCN4P51793 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.59■□□□□ 0.73
CLCN4P51793 AC138894.3-201ENST00000603787 634 ntBASIC19.59■□□□□ 0.73
CLCN4P51793 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.59■□□□□ 0.73
CLCN4P51793 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLCN4P51793 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLCN4P51793 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLCN4P51793 IRX1P1-201ENST00000438849 1838 ntBASIC19.59■□□□□ 0.73
CLCN4P51793 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.59■□□□□ 0.73
CLCN4P51793 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.59■□□□□ 0.73
CLCN4P51793 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLCN4P51793 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLCN4P51793 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLCN4P51793 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLCN4P51793 LINC00167-201ENST00000530583 1419 ntBASIC19.59■□□□□ 0.73
CLCN4P51793 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLCN4P51793 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
CLCN4P51793 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.58■□□□□ 0.73
CLCN4P51793 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLCN4P51793 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
CLCN4P51793 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.58■□□□□ 0.73
CLCN4P51793 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
CLCN4P51793 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLCN4P51793 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLCN4P51793 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CLCN4P51793 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLCN4P51793 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLCN4P51793 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.58■□□□□ 0.72
CLCN4P51793 IGHGP-201ENST00000390555 1178 ntBASIC19.58■□□□□ 0.72
CLCN4P51793 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLCN4P51793 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.58■□□□□ 0.72
CLCN4P51793 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLCN4P51793 BMF-207ENST00000559701 630 ntTSL 3 BASIC19.58■□□□□ 0.72
CLCN4P51793 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CLCN4P51793 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.58■□□□□ 0.72
CLCN4P51793 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.58■□□□□ 0.72
CLCN4P51793 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.58■□□□□ 0.72
CLCN4P51793 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CLCN4P51793 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
CLCN4P51793 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.58■□□□□ 0.72
CLCN4P51793 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
CLCN4P51793 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLCN4P51793 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLCN4P51793 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CLCN4P51793 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLCN4P51793 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.57■□□□□ 0.72
CLCN4P51793 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
CLCN4P51793 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLCN4P51793 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLCN4P51793 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms