Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
TNFSF9P41273 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.18■□□□□ 0.82
TNFSF9P41273 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TNFSF9P41273 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.18■□□□□ 0.82
TNFSF9P41273 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.18■□□□□ 0.82
TNFSF9P41273 KRT8P50-201ENST00000562022 1438 ntBASIC20.18■□□□□ 0.82
TNFSF9P41273 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TNFSF9P41273 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
TNFSF9P41273 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TNFSF9P41273 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.17■□□□□ 0.82
TNFSF9P41273 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
TNFSF9P41273 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TNFSF9P41273 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TNFSF9P41273 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
TNFSF9P41273 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TNFSF9P41273 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TNFSF9P41273 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.17■□□□□ 0.82
TNFSF9P41273 ANO7L1-203ENST00000602586 1720 ntBASIC20.17■□□□□ 0.82
TNFSF9P41273 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.17■□□□□ 0.82
TNFSF9P41273 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TNFSF9P41273 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TNFSF9P41273 AL031133.1-201ENST00000406807 723 ntBASIC20.17■□□□□ 0.82
TNFSF9P41273 AC112907.2-201ENST00000448639 330 ntBASIC20.17■□□□□ 0.82
TNFSF9P41273 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.17■□□□□ 0.82
TNFSF9P41273 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
TNFSF9P41273 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.17■□□□□ 0.82
TNFSF9P41273 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC20.17■□□□□ 0.82
TNFSF9P41273 HYMAI.1-201ENST00000620949 238 ntBASIC20.17■□□□□ 0.82
TNFSF9P41273 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TNFSF9P41273 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
TNFSF9P41273 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TNFSF9P41273 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TNFSF9P41273 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TNFSF9P41273 KRT8P7-201ENST00000533003 1432 ntBASIC20.17■□□□□ 0.82
TNFSF9P41273 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TNFSF9P41273 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.17■□□□□ 0.82
TNFSF9P41273 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
TNFSF9P41273 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TNFSF9P41273 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TNFSF9P41273 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TNFSF9P41273 AL031598.1-201ENST00000561511 1773 ntBASIC20.16■□□□□ 0.82
TNFSF9P41273 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TNFSF9P41273 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
TNFSF9P41273 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TNFSF9P41273 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TNFSF9P41273 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TNFSF9P41273 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.16■□□□□ 0.82
TNFSF9P41273 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TNFSF9P41273 AC092597.1-201ENST00000487352 616 ntBASIC20.16■□□□□ 0.82
TNFSF9P41273 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TNFSF9P41273 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TNFSF9P41273 LINC01238-205ENST00000567549 1107 ntBASIC20.16■□□□□ 0.82
TNFSF9P41273 AC087388.1-201ENST00000571370 1112 ntBASIC20.16■□□□□ 0.82
TNFSF9P41273 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.16■□□□□ 0.82
TNFSF9P41273 AC010240.3-201ENST00000607688 395 ntBASIC20.16■□□□□ 0.82
TNFSF9P41273 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.16■□□□□ 0.82
TNFSF9P41273 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TNFSF9P41273 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.16■□□□□ 0.82
TNFSF9P41273 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.16■□□□□ 0.82
TNFSF9P41273 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TNFSF9P41273 AC093525.10-201ENST00000625130 1569 ntBASIC20.16■□□□□ 0.82
TNFSF9P41273 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20.16■□□□□ 0.82
TNFSF9P41273 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.15■□□□□ 0.82
TNFSF9P41273 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TNFSF9P41273 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.15■□□□□ 0.82
TNFSF9P41273 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
TNFSF9P41273 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
TNFSF9P41273 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.15■□□□□ 0.82
TNFSF9P41273 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TNFSF9P41273 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TNFSF9P41273 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.15■□□□□ 0.82
TNFSF9P41273 MIR3917-201ENST00000580971 93 ntBASIC20.15■□□□□ 0.82
TNFSF9P41273 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.15■□□□□ 0.82
TNFSF9P41273 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TNFSF9P41273 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.15■□□□□ 0.82
TNFSF9P41273 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
TNFSF9P41273 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
TNFSF9P41273 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TNFSF9P41273 BX323043.1-201ENST00000641006 1765 ntBASIC20.15■□□□□ 0.82
TNFSF9P41273 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
TNFSF9P41273 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
TNFSF9P41273 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.14■□□□□ 0.82
TNFSF9P41273 AC093503.3-201ENST00000624917 2352 ntBASIC20.14■□□□□ 0.82
TNFSF9P41273 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
TNFSF9P41273 TNXA-203ENST00000507684 2038 ntBASIC20.14■□□□□ 0.81
TNFSF9P41273 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TNFSF9P41273 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TNFSF9P41273 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TNFSF9P41273 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
TNFSF9P41273 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TNFSF9P41273 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.14■□□□□ 0.81
TNFSF9P41273 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TNFSF9P41273 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TNFSF9P41273 AL671277.2-201ENST00000458060 996 ntBASIC20.14■□□□□ 0.81
TNFSF9P41273 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.14■□□□□ 0.81
TNFSF9P41273 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TNFSF9P41273 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC20.14■□□□□ 0.81
TNFSF9P41273 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.14■□□□□ 0.81
TNFSF9P41273 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
TNFSF9P41273 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms