Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
KRT20P35900 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KRT20P35900 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.74■□□□□ 0.43
KRT20P35900 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
KRT20P35900 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.74■□□□□ 0.43
KRT20P35900 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.74■□□□□ 0.43
KRT20P35900 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.74■□□□□ 0.43
KRT20P35900 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KRT20P35900 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.74■□□□□ 0.43
KRT20P35900 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KRT20P35900 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KRT20P35900 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
KRT20P35900 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
KRT20P35900 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.74■□□□□ 0.43
KRT20P35900 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.74■□□□□ 0.43
KRT20P35900 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.74■□□□□ 0.43
KRT20P35900 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.74■□□□□ 0.43
KRT20P35900 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.74■□□□□ 0.43
KRT20P35900 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.74■□□□□ 0.43
KRT20P35900 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KRT20P35900 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
KRT20P35900 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KRT20P35900 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.74■□□□□ 0.43
KRT20P35900 AC141586.3-201ENST00000562166 1838 ntBASIC17.74■□□□□ 0.43
KRT20P35900 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
KRT20P35900 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
KRT20P35900 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
KRT20P35900 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KRT20P35900 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
KRT20P35900 SDHAP1-207ENST00000440850 2000 ntBASIC17.74■□□□□ 0.43
KRT20P35900 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.74■□□□□ 0.43
KRT20P35900 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
KRT20P35900 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KRT20P35900 AL031598.1-201ENST00000561511 1773 ntBASIC17.74■□□□□ 0.43
KRT20P35900 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KRT20P35900 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
KRT20P35900 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
KRT20P35900 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KRT20P35900 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.73■□□□□ 0.43
KRT20P35900 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KRT20P35900 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.73■□□□□ 0.43
KRT20P35900 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KRT20P35900 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KRT20P35900 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KRT20P35900 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
KRT20P35900 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
KRT20P35900 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KRT20P35900 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
KRT20P35900 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
KRT20P35900 AC004951.3-201ENST00000418645 1148 ntBASIC17.73■□□□□ 0.43
KRT20P35900 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.73■□□□□ 0.43
KRT20P35900 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.73■□□□□ 0.43
KRT20P35900 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.73■□□□□ 0.43
KRT20P35900 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.73■□□□□ 0.43
KRT20P35900 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.73■□□□□ 0.43
KRT20P35900 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.73■□□□□ 0.43
KRT20P35900 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
KRT20P35900 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.73■□□□□ 0.43
KRT20P35900 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KRT20P35900 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
KRT20P35900 FSCN1P1-201ENST00000568912 1481 ntBASIC17.73■□□□□ 0.43
KRT20P35900 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
KRT20P35900 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KRT20P35900 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KRT20P35900 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
KRT20P35900 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KRT20P35900 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.73■□□□□ 0.43
KRT20P35900 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
KRT20P35900 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
KRT20P35900 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.72■□□□□ 0.43
KRT20P35900 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KRT20P35900 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KRT20P35900 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
KRT20P35900 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
KRT20P35900 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
KRT20P35900 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
KRT20P35900 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.72■□□□□ 0.43
KRT20P35900 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KRT20P35900 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.72■□□□□ 0.43
KRT20P35900 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.72■□□□□ 0.43
KRT20P35900 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.72■□□□□ 0.43
KRT20P35900 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KRT20P35900 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
KRT20P35900 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.72■□□□□ 0.43
KRT20P35900 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
KRT20P35900 AC093827.2-201ENST00000512654 315 ntBASIC17.72■□□□□ 0.43
KRT20P35900 MIR4785-201ENST00000585005 73 ntBASIC17.72■□□□□ 0.43
KRT20P35900 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.72■□□□□ 0.43
KRT20P35900 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
KRT20P35900 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KRT20P35900 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.72■□□□□ 0.43
KRT20P35900 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
KRT20P35900 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.72■□□□□ 0.43
KRT20P35900 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT20P35900 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
KRT20P35900 AL354751.1-201ENST00000412768 1863 ntBASIC17.71■□□□□ 0.43
KRT20P35900 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.71■□□□□ 0.43
KRT20P35900 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
KRT20P35900 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.71■□□□□ 0.43
KRT20P35900 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms