Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AC026471.5-201ENST00000615068 467 ntBASIC17.72■□□□□ 0.43
PTPN6P29350 CR392000.1-201ENST00000624770 1228 ntBASIC17.72■□□□□ 0.43
PTPN6P29350 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.72■□□□□ 0.43
PTPN6P29350 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN6P29350 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN6P29350 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
PTPN6P29350 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN6P29350 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN6P29350 KRT16P1-201ENST00000399124 1418 ntBASIC17.72■□□□□ 0.43
PTPN6P29350 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.72■□□□□ 0.43
PTPN6P29350 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
PTPN6P29350 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
PTPN6P29350 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.71■□□□□ 0.43
PTPN6P29350 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTPN6P29350 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
PTPN6P29350 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTPN6P29350 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTPN6P29350 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.71■□□□□ 0.43
PTPN6P29350 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTPN6P29350 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.71■□□□□ 0.43
PTPN6P29350 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PTPN6P29350 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTPN6P29350 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTPN6P29350 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTPN6P29350 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
PTPN6P29350 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTPN6P29350 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.71■□□□□ 0.43
PTPN6P29350 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTPN6P29350 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PTPN6P29350 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTPN6P29350 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.71■□□□□ 0.43
PTPN6P29350 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PTPN6P29350 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PTPN6P29350 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.71■□□□□ 0.43
PTPN6P29350 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.71■□□□□ 0.43
PTPN6P29350 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTPN6P29350 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.42
PTPN6P29350 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
PTPN6P29350 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.7■□□□□ 0.42
PTPN6P29350 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN6P29350 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.7■□□□□ 0.42
PTPN6P29350 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
PTPN6P29350 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN6P29350 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN6P29350 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN6P29350 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN6P29350 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN6P29350 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN6P29350 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN6P29350 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN6P29350 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN6P29350 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN6P29350 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN6P29350 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.7■□□□□ 0.42
PTPN6P29350 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
PTPN6P29350 AL355355.2-201ENST00000442321 338 ntBASIC17.7■□□□□ 0.42
PTPN6P29350 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN6P29350 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN6P29350 PRSS44-201ENST00000515154 1146 ntBASIC17.7■□□□□ 0.42
PTPN6P29350 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.7■□□□□ 0.42
PTPN6P29350 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN6P29350 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.7■□□□□ 0.42
PTPN6P29350 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.7■□□□□ 0.42
PTPN6P29350 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
PTPN6P29350 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.7■□□□□ 0.42
PTPN6P29350 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN6P29350 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.7■□□□□ 0.42
PTPN6P29350 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.7■□□□□ 0.42
PTPN6P29350 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN6P29350 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
PTPN6P29350 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN6P29350 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN6P29350 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN6P29350 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN6P29350 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN6P29350 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.69■□□□□ 0.42
PTPN6P29350 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN6P29350 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN6P29350 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.69■□□□□ 0.42
PTPN6P29350 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
PTPN6P29350 NUDT16P1-203ENST00000513809 620 ntBASIC17.69■□□□□ 0.42
PTPN6P29350 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.69■□□□□ 0.42
PTPN6P29350 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
PTPN6P29350 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN6P29350 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN6P29350 AL357033.4-201ENST00000617703 1807 ntBASIC17.69■□□□□ 0.42
PTPN6P29350 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN6P29350 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.69■□□□□ 0.42
PTPN6P29350 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN6P29350 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.69■□□□□ 0.42
PTPN6P29350 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN6P29350 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.69■□□□□ 0.42
PTPN6P29350 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.69■□□□□ 0.42
PTPN6P29350 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.69■□□□□ 0.42
PTPN6P29350 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.69■□□□□ 0.42
PTPN6P29350 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
PTPN6P29350 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN6P29350 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.68■□□□□ 0.42
PTPN6P29350 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN6P29350 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms