Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC15.75■□□□□ 0.11
COL8A2P25067 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC15.75■□□□□ 0.11
COL8A2P25067 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC15.75■□□□□ 0.11
COL8A2P25067 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
COL8A2P25067 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC15.75■□□□□ 0.11
COL8A2P25067 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC15.75■□□□□ 0.11
COL8A2P25067 AC112497.1-201ENST00000624824 639 ntBASIC15.75■□□□□ 0.11
COL8A2P25067 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
COL8A2P25067 AP000550.4-202ENST00000639755 178 ntBASIC15.75■□□□□ 0.11
COL8A2P25067 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC15.75■□□□□ 0.11
COL8A2P25067 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
COL8A2P25067 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
COL8A2P25067 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
COL8A2P25067 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
COL8A2P25067 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
COL8A2P25067 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
COL8A2P25067 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
COL8A2P25067 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC15.75■□□□□ 0.11
COL8A2P25067 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC15.75■□□□□ 0.11
COL8A2P25067 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC15.75■□□□□ 0.11
COL8A2P25067 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
COL8A2P25067 AC018445.3-201ENST00000624177 1945 ntBASIC15.74■□□□□ 0.11
COL8A2P25067 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC15.74■□□□□ 0.11
COL8A2P25067 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
COL8A2P25067 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
COL8A2P25067 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
COL8A2P25067 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
COL8A2P25067 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
COL8A2P25067 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
COL8A2P25067 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
COL8A2P25067 ENSA-205ENST00000361532 792 ntTSL 2 BASIC15.74■□□□□ 0.11
COL8A2P25067 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
COL8A2P25067 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
COL8A2P25067 DAP-202ENST00000432074 1048 ntTSL 2 BASIC15.74■□□□□ 0.11
COL8A2P25067 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
COL8A2P25067 AC092597.1-201ENST00000487352 616 ntBASIC15.74■□□□□ 0.11
COL8A2P25067 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC15.74■□□□□ 0.11
COL8A2P25067 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC15.74■□□□□ 0.11
COL8A2P25067 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC15.74■□□□□ 0.11
COL8A2P25067 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC15.74■□□□□ 0.11
COL8A2P25067 DBP-204ENST00000599385 709 ntTSL 3 BASIC15.74■□□□□ 0.11
COL8A2P25067 AC083849.1-201ENST00000615227 514 ntBASIC15.74■□□□□ 0.11
COL8A2P25067 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC15.74■□□□□ 0.11
COL8A2P25067 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC15.74■□□□□ 0.11
COL8A2P25067 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
COL8A2P25067 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
COL8A2P25067 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
COL8A2P25067 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC15.74■□□□□ 0.11
COL8A2P25067 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
COL8A2P25067 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
COL8A2P25067 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
COL8A2P25067 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC15.74■□□□□ 0.11
COL8A2P25067 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
COL8A2P25067 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
COL8A2P25067 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC15.73■□□□□ 0.11
COL8A2P25067 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
COL8A2P25067 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
COL8A2P25067 AC005332.1-201ENST00000577698 1310 ntBASIC15.73■□□□□ 0.11
COL8A2P25067 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
COL8A2P25067 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC15.73■□□□□ 0.11
COL8A2P25067 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
COL8A2P25067 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
COL8A2P25067 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
COL8A2P25067 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
COL8A2P25067 MIR564-202ENST00000385049 94 ntBASIC15.73■□□□□ 0.11
COL8A2P25067 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
COL8A2P25067 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
COL8A2P25067 KRT18P23-201ENST00000435622 1283 ntBASIC15.73■□□□□ 0.11
COL8A2P25067 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC15.73■□□□□ 0.11
COL8A2P25067 SEC1P-202ENST00000473944 940 ntBASIC15.73■□□□□ 0.11
COL8A2P25067 AC034232.1-201ENST00000506026 1064 ntBASIC15.73■□□□□ 0.11
COL8A2P25067 ZNF444P1-201ENST00000559497 298 ntBASIC15.73■□□□□ 0.11
COL8A2P25067 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC15.73■□□□□ 0.11
COL8A2P25067 FGF14-AS2-201ENST00000606448 1074 ntBASIC15.73■□□□□ 0.11
COL8A2P25067 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC15.73■□□□□ 0.11
COL8A2P25067 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC15.73■□□□□ 0.11
COL8A2P25067 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
COL8A2P25067 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
COL8A2P25067 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
COL8A2P25067 IER3-202ENST00000376377 1350 ntBASIC15.73■□□□□ 0.11
COL8A2P25067 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
COL8A2P25067 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
COL8A2P25067 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
COL8A2P25067 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC15.72■□□□□ 0.11
COL8A2P25067 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL8A2P25067 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL8A2P25067 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC15.72■□□□□ 0.11
COL8A2P25067 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
COL8A2P25067 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL8A2P25067 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL8A2P25067 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL8A2P25067 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
COL8A2P25067 AC005332.7-201ENST00000614046 2005 ntBASIC15.72■□□□□ 0.11
COL8A2P25067 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL8A2P25067 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL8A2P25067 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL8A2P25067 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL8A2P25067 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL8A2P25067 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
COL8A2P25067 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms