Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RFX1P22670 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.3■□□□□ 0.84
RFX1P22670 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20.3■□□□□ 0.84
RFX1P22670 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC20.3■□□□□ 0.84
RFX1P22670 AC097488.1-201ENST00000507834 756 ntBASIC20.3■□□□□ 0.84
RFX1P22670 NMU-205ENST00000511469 756 ntTSL 3 BASIC20.3■□□□□ 0.84
RFX1P22670 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RFX1P22670 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC20.3■□□□□ 0.84
RFX1P22670 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RFX1P22670 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.3■□□□□ 0.84
RFX1P22670 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RFX1P22670 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
RFX1P22670 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
RFX1P22670 AC090164.3-201ENST00000610780 2143 ntBASIC20.3■□□□□ 0.84
RFX1P22670 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.3■□□□□ 0.84
RFX1P22670 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
RFX1P22670 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
RFX1P22670 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RFX1P22670 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RFX1P22670 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.29■□□□□ 0.84
RFX1P22670 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RFX1P22670 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
RFX1P22670 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RFX1P22670 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
RFX1P22670 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RFX1P22670 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
RFX1P22670 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.29■□□□□ 0.84
RFX1P22670 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RFX1P22670 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
RFX1P22670 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RFX1P22670 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.29■□□□□ 0.84
RFX1P22670 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.29■□□□□ 0.84
RFX1P22670 AL121894.2-201ENST00000602977 491 ntBASIC20.29■□□□□ 0.84
RFX1P22670 DGCR10-201ENST00000609839 495 ntBASIC20.29■□□□□ 0.84
RFX1P22670 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
RFX1P22670 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
RFX1P22670 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.29■□□□□ 0.84
RFX1P22670 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.29■□□□□ 0.84
RFX1P22670 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RFX1P22670 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
RFX1P22670 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RFX1P22670 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.29■□□□□ 0.84
RFX1P22670 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RFX1P22670 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RFX1P22670 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.28■□□□□ 0.84
RFX1P22670 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RFX1P22670 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC20.28■□□□□ 0.84
RFX1P22670 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.28■□□□□ 0.84
RFX1P22670 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RFX1P22670 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC20.28■□□□□ 0.84
RFX1P22670 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RFX1P22670 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
RFX1P22670 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.28■□□□□ 0.84
RFX1P22670 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC20.28■□□□□ 0.84
RFX1P22670 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RFX1P22670 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RFX1P22670 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RFX1P22670 AP005242.2-201ENST00000580065 1175 ntBASIC20.28■□□□□ 0.84
RFX1P22670 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
RFX1P22670 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RFX1P22670 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RFX1P22670 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RFX1P22670 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.28■□□□□ 0.84
RFX1P22670 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RFX1P22670 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.27■□□□□ 0.84
RFX1P22670 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.27■□□□□ 0.84
RFX1P22670 MTMR9LP-203ENST00000426597 1545 ntBASIC20.27■□□□□ 0.84
RFX1P22670 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RFX1P22670 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RFX1P22670 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
RFX1P22670 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RFX1P22670 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RFX1P22670 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.27■□□□□ 0.84
RFX1P22670 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
RFX1P22670 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RFX1P22670 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.27■□□□□ 0.84
RFX1P22670 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RFX1P22670 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
RFX1P22670 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RFX1P22670 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RFX1P22670 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RFX1P22670 TSPY14P-201ENST00000303979 915 ntBASIC20.27■□□□□ 0.84
RFX1P22670 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RFX1P22670 AC063952.2-201ENST00000498792 1227 ntBASIC20.27■□□□□ 0.84
RFX1P22670 KRT126P-201ENST00000549467 1181 ntBASIC20.27■□□□□ 0.84
RFX1P22670 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC20.27■□□□□ 0.84
RFX1P22670 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC20.27■□□□□ 0.84
RFX1P22670 GPX4-207ENST00000589115 812 ntTSL 2 BASIC20.27■□□□□ 0.84
RFX1P22670 AP000692.2-201ENST00000608391 879 ntBASIC20.27■□□□□ 0.84
RFX1P22670 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC20.27■□□□□ 0.84
RFX1P22670 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
RFX1P22670 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RFX1P22670 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
RFX1P22670 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
RFX1P22670 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.27■□□□□ 0.83
RFX1P22670 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RFX1P22670 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RFX1P22670 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.26■□□□□ 0.83
RFX1P22670 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.26■□□□□ 0.83
RFX1P22670 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms