Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.07■□□□□ 0.16
CCL1P22362 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCL1P22362 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.07■□□□□ 0.16
CCL1P22362 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCL1P22362 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCL1P22362 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCL1P22362 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.06■□□□□ 0.16
CCL1P22362 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.06■□□□□ 0.16
CCL1P22362 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.06■□□□□ 0.16
CCL1P22362 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.06■□□□□ 0.16
CCL1P22362 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCL1P22362 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCL1P22362 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCL1P22362 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.06■□□□□ 0.16
CCL1P22362 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCL1P22362 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCL1P22362 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.06■□□□□ 0.16
CCL1P22362 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCL1P22362 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCL1P22362 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CCL1P22362 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CCL1P22362 MCCD1P1-208ENST00000445732 328 ntBASIC16.06■□□□□ 0.16
CCL1P22362 FAM201B-201ENST00000458407 597 ntBASIC16.06■□□□□ 0.16
CCL1P22362 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.06■□□□□ 0.16
CCL1P22362 NUDT16P1-203ENST00000513809 620 ntBASIC16.06■□□□□ 0.16
CCL1P22362 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.06■□□□□ 0.16
CCL1P22362 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC16.06■□□□□ 0.16
CCL1P22362 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CCL1P22362 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCL1P22362 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCL1P22362 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.06■□□□□ 0.16
CCL1P22362 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCL1P22362 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCL1P22362 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCL1P22362 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCL1P22362 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.06■□□□□ 0.16
CCL1P22362 AC008764.6-201ENST00000595909 2069 ntBASIC16.06■□□□□ 0.16
CCL1P22362 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CCL1P22362 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.05■□□□□ 0.16
CCL1P22362 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC16.05■□□□□ 0.16
CCL1P22362 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCL1P22362 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCL1P22362 GPAT2P1-201ENST00000444924 1672 ntBASIC16.05■□□□□ 0.16
CCL1P22362 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CCL1P22362 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CCL1P22362 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.05■□□□□ 0.16
CCL1P22362 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCL1P22362 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCL1P22362 MFAP1P1-201ENST00000442257 1255 ntBASIC16.05■□□□□ 0.16
CCL1P22362 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCL1P22362 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.05■□□□□ 0.16
CCL1P22362 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.05■□□□□ 0.16
CCL1P22362 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCL1P22362 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCL1P22362 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCL1P22362 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CCL1P22362 AL133373.2-201ENST00000623187 2828 ntBASIC16.05■□□□□ 0.16
CCL1P22362 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CCL1P22362 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CCL1P22362 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.05■□□□□ 0.16
CCL1P22362 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCL1P22362 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCL1P22362 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.04■□□□□ 0.16
CCL1P22362 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCL1P22362 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCL1P22362 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCL1P22362 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CCL1P22362 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCL1P22362 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCL1P22362 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCL1P22362 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.04■□□□□ 0.16
CCL1P22362 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.04■□□□□ 0.16
CCL1P22362 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
CCL1P22362 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
CCL1P22362 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CCL1P22362 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.04■□□□□ 0.16
CCL1P22362 KRT18P29-201ENST00000397031 1267 ntBASIC16.04■□□□□ 0.16
CCL1P22362 SLC25A6P5-201ENST00000435663 894 ntBASIC16.04■□□□□ 0.16
CCL1P22362 DENND3-207ENST00000518347 850 ntTSL 2 BASIC16.04■□□□□ 0.16
CCL1P22362 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.04■□□□□ 0.16
CCL1P22362 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCL1P22362 AC018470.1-201ENST00000624790 3129 ntBASIC16.04■□□□□ 0.16
CCL1P22362 AC034236.2-201ENST00000606662 1610 ntBASIC16.04■□□□□ 0.16
CCL1P22362 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCL1P22362 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCL1P22362 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCL1P22362 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCL1P22362 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCL1P22362 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.04■□□□□ 0.16
CCL1P22362 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCL1P22362 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCL1P22362 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CCL1P22362 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCL1P22362 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCL1P22362 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCL1P22362 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCL1P22362 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CCL1P22362 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CCL1P22362 ESPNP-201ENST00000270691 2015 ntBASIC16.03■□□□□ 0.16
CCL1P22362 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms