Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.28□□□□□ -0.12
RAB4AP20338 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB4AP20338 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB4AP20338 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB4AP20338 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.28□□□□□ -0.12
RAB4AP20338 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB4AP20338 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB4AP20338 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB4AP20338 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB4AP20338 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB4AP20338 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB4AP20338 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB4AP20338 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
RAB4AP20338 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RAB4AP20338 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RAB4AP20338 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RAB4AP20338 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RAB4AP20338 NT5C3AP1-201ENST00000394500 1012 ntBASIC14.28□□□□□ -0.12
RAB4AP20338 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC14.28□□□□□ -0.12
RAB4AP20338 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB4AP20338 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
RAB4AP20338 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RAB4AP20338 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RAB4AP20338 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RAB4AP20338 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC14.28□□□□□ -0.12
RAB4AP20338 KRT8P17-201ENST00000453110 1448 ntBASIC14.28□□□□□ -0.12
RAB4AP20338 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC14.28□□□□□ -0.12
RAB4AP20338 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
RAB4AP20338 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB4AP20338 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC14.28□□□□□ -0.12
RAB4AP20338 DUX4L2-201ENST00000561772 1275 ntBASIC14.28□□□□□ -0.12
RAB4AP20338 AL161938.1-201ENST00000569833 2180 ntBASIC14.28□□□□□ -0.12
RAB4AP20338 AC006333.2-201ENST00000607957 2099 ntBASIC14.28□□□□□ -0.12
RAB4AP20338 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC14.28□□□□□ -0.12
RAB4AP20338 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC14.28□□□□□ -0.12
RAB4AP20338 AC093525.10-201ENST00000625130 1569 ntBASIC14.28□□□□□ -0.12
RAB4AP20338 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC14.28□□□□□ -0.12
RAB4AP20338 DUX4L6-201ENST00000626483 1275 ntBASIC14.28□□□□□ -0.12
RAB4AP20338 DUX4L1-201ENST00000627662 1275 ntBASIC14.28□□□□□ -0.12
RAB4AP20338 DUX4L8-201ENST00000629013 1275 ntBASIC14.28□□□□□ -0.12
RAB4AP20338 DUX4L3-201ENST00000630187 1275 ntBASIC14.28□□□□□ -0.12
RAB4AP20338 DUX4L7-201ENST00000630678 1275 ntBASIC14.28□□□□□ -0.12
RAB4AP20338 DUX4L5-201ENST00000630834 1275 ntBASIC14.28□□□□□ -0.12
RAB4AP20338 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB4AP20338 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB4AP20338 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB4AP20338 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RAB4AP20338 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB4AP20338 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
RAB4AP20338 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.12
RAB4AP20338 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
RAB4AP20338 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
RAB4AP20338 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC14.27□□□□□ -0.12
RAB4AP20338 LINC00896-202ENST00000609602 2128 ntBASIC14.27□□□□□ -0.12
RAB4AP20338 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.12
RAB4AP20338 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC14.27□□□□□ -0.12
RAB4AP20338 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
RAB4AP20338 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RAB4AP20338 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC14.27□□□□□ -0.12
RAB4AP20338 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RAB4AP20338 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RAB4AP20338 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RAB4AP20338 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RAB4AP20338 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RAB4AP20338 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
RAB4AP20338 RBM17P2-201ENST00000616397 1405 ntBASIC14.27□□□□□ -0.12
RAB4AP20338 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
RAB4AP20338 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
RAB4AP20338 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RAB4AP20338 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
RAB4AP20338 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC14.27□□□□□ -0.13
RAB4AP20338 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAB4AP20338 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC14.27□□□□□ -0.13
RAB4AP20338 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RAB4AP20338 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RAB4AP20338 FGF8-207ENST00000618991 856 ntTSL 3 BASIC14.27□□□□□ -0.13
RAB4AP20338 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RAB4AP20338 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
RAB4AP20338 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAB4AP20338 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC14.27□□□□□ -0.13
RAB4AP20338 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC14.27□□□□□ -0.13
RAB4AP20338 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RAB4AP20338 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAB4AP20338 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RAB4AP20338 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
RAB4AP20338 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.27□□□□□ -0.13
RAB4AP20338 AL031598.1-201ENST00000561511 1773 ntBASIC14.27□□□□□ -0.13
RAB4AP20338 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAB4AP20338 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB4AP20338 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.26□□□□□ -0.13
RAB4AP20338 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RAB4AP20338 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB4AP20338 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RAB4AP20338 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RAB4AP20338 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
RAB4AP20338 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB4AP20338 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB4AP20338 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB4AP20338 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
RAB4AP20338 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms