Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PRKCAP17252 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
PRKCAP17252 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.27■□□□□ 0.36
PRKCAP17252 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRKCAP17252 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.27■□□□□ 0.36
PRKCAP17252 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRKCAP17252 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRKCAP17252 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRKCAP17252 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.27■□□□□ 0.36
PRKCAP17252 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
PRKCAP17252 CKBP1-201ENST00000565489 1086 ntBASIC17.27■□□□□ 0.36
PRKCAP17252 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.27■□□□□ 0.36
PRKCAP17252 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.27■□□□□ 0.36
PRKCAP17252 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRKCAP17252 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
PRKCAP17252 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRKCAP17252 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
PRKCAP17252 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PRKCAP17252 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
PRKCAP17252 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
PRKCAP17252 AC090340.1-201ENST00000620778 4980 ntBASIC17.27■□□□□ 0.35
PRKCAP17252 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PRKCAP17252 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PRKCAP17252 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PRKCAP17252 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
PRKCAP17252 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
PRKCAP17252 AC096733.2-201ENST00000609937 1394 ntBASIC17.27■□□□□ 0.35
PRKCAP17252 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PRKCAP17252 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PRKCAP17252 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRKCAP17252 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRKCAP17252 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PRKCAP17252 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PRKCAP17252 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PRKCAP17252 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
PRKCAP17252 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.26■□□□□ 0.35
PRKCAP17252 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRKCAP17252 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRKCAP17252 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PRKCAP17252 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.26■□□□□ 0.35
PRKCAP17252 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRKCAP17252 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.26■□□□□ 0.35
PRKCAP17252 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRKCAP17252 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
PRKCAP17252 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PRKCAP17252 AL596275.1-201ENST00000423464 877 ntBASIC17.26■□□□□ 0.35
PRKCAP17252 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.26■□□□□ 0.35
PRKCAP17252 RBM17P1-201ENST00000453646 1190 ntBASIC17.26■□□□□ 0.35
PRKCAP17252 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.26■□□□□ 0.35
PRKCAP17252 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.26■□□□□ 0.35
PRKCAP17252 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
PRKCAP17252 SLC25A1P4-201ENST00000567977 778 ntBASIC17.26■□□□□ 0.35
PRKCAP17252 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.26■□□□□ 0.35
PRKCAP17252 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRKCAP17252 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
PRKCAP17252 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.26■□□□□ 0.35
PRKCAP17252 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRKCAP17252 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.26■□□□□ 0.35
PRKCAP17252 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
PRKCAP17252 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PRKCAP17252 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRKCAP17252 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PRKCAP17252 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRKCAP17252 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRKCAP17252 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRKCAP17252 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.26■□□□□ 0.35
PRKCAP17252 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRKCAP17252 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PRKCAP17252 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRKCAP17252 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRKCAP17252 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRKCAP17252 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.25■□□□□ 0.35
PRKCAP17252 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRKCAP17252 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.25■□□□□ 0.35
PRKCAP17252 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
PRKCAP17252 AC104581.1-202ENST00000635932 2618 ntBASIC17.25■□□□□ 0.35
PRKCAP17252 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.25■□□□□ 0.35
PRKCAP17252 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRKCAP17252 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRKCAP17252 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRKCAP17252 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRKCAP17252 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.25■□□□□ 0.35
PRKCAP17252 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRKCAP17252 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
PRKCAP17252 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRKCAP17252 UNC93B2-201ENST00000285383 730 ntBASIC17.25■□□□□ 0.35
PRKCAP17252 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PRKCAP17252 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.25■□□□□ 0.35
PRKCAP17252 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.25■□□□□ 0.35
PRKCAP17252 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PRKCAP17252 AC097488.1-201ENST00000507834 756 ntBASIC17.25■□□□□ 0.35
PRKCAP17252 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PRKCAP17252 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.25■□□□□ 0.35
PRKCAP17252 AL355075.4-201ENST00000554988 638 ntBASIC17.25■□□□□ 0.35
PRKCAP17252 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.25■□□□□ 0.35
PRKCAP17252 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRKCAP17252 BCL2-203ENST00000589955 5011 ntBASIC17.25■□□□□ 0.35
PRKCAP17252 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRKCAP17252 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRKCAP17252 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms