Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
CSB-PGBD3P0DP91 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC24.68■■□□□ 1.54
CSB-PGBD3P0DP91 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC24.68■■□□□ 1.54
CSB-PGBD3P0DP91 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CSB-PGBD3P0DP91 IGHV3OR16-7-201ENST00000604106 360 ntBASIC24.68■■□□□ 1.54
CSB-PGBD3P0DP91 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC24.68■■□□□ 1.54
CSB-PGBD3P0DP91 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC24.68■■□□□ 1.54
CSB-PGBD3P0DP91 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
CSB-PGBD3P0DP91 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CSB-PGBD3P0DP91 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CSB-PGBD3P0DP91 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
CSB-PGBD3P0DP91 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CSB-PGBD3P0DP91 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
CSB-PGBD3P0DP91 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CSB-PGBD3P0DP91 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
CSB-PGBD3P0DP91 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CSB-PGBD3P0DP91 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CSB-PGBD3P0DP91 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC24.67■■□□□ 1.54
CSB-PGBD3P0DP91 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CSB-PGBD3P0DP91 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CSB-PGBD3P0DP91 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
CSB-PGBD3P0DP91 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC24.67■■□□□ 1.54
CSB-PGBD3P0DP91 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC24.67■■□□□ 1.54
CSB-PGBD3P0DP91 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC24.67■■□□□ 1.54
CSB-PGBD3P0DP91 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CSB-PGBD3P0DP91 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CSB-PGBD3P0DP91 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
CSB-PGBD3P0DP91 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC24.67■■□□□ 1.54
CSB-PGBD3P0DP91 CDV3-207ENST00000508481 661 ntTSL 3 BASIC24.67■■□□□ 1.54
CSB-PGBD3P0DP91 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC24.67■■□□□ 1.54
CSB-PGBD3P0DP91 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC24.67■■□□□ 1.54
CSB-PGBD3P0DP91 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
CSB-PGBD3P0DP91 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC24.67■■□□□ 1.54
CSB-PGBD3P0DP91 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
CSB-PGBD3P0DP91 IL9RP2-201ENST00000423948 1312 ntBASIC24.66■■□□□ 1.54
CSB-PGBD3P0DP91 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC24.66■■□□□ 1.54
CSB-PGBD3P0DP91 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
CSB-PGBD3P0DP91 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CSB-PGBD3P0DP91 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CSB-PGBD3P0DP91 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC24.66■■□□□ 1.54
CSB-PGBD3P0DP91 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC24.66■■□□□ 1.54
CSB-PGBD3P0DP91 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC24.66■■□□□ 1.54
CSB-PGBD3P0DP91 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC24.66■■□□□ 1.54
CSB-PGBD3P0DP91 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
CSB-PGBD3P0DP91 ABBA01031661.1-201ENST00000634362 1253 ntBASIC24.66■■□□□ 1.54
CSB-PGBD3P0DP91 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CSB-PGBD3P0DP91 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CSB-PGBD3P0DP91 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
CSB-PGBD3P0DP91 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CSB-PGBD3P0DP91 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CSB-PGBD3P0DP91 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CSB-PGBD3P0DP91 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC24.66■■□□□ 1.54
CSB-PGBD3P0DP91 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CSB-PGBD3P0DP91 IRX1P1-201ENST00000438849 1838 ntBASIC24.65■■□□□ 1.54
CSB-PGBD3P0DP91 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CSB-PGBD3P0DP91 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
CSB-PGBD3P0DP91 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC24.65■■□□□ 1.54
CSB-PGBD3P0DP91 TREX1-205ENST00000625293 1783 ntBASIC24.65■■□□□ 1.54
CSB-PGBD3P0DP91 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC24.65■■□□□ 1.54
CSB-PGBD3P0DP91 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC24.65■■□□□ 1.54
CSB-PGBD3P0DP91 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CSB-PGBD3P0DP91 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
CSB-PGBD3P0DP91 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
CSB-PGBD3P0DP91 PMS2P1-201ENST00000431037 1228 ntBASIC24.65■■□□□ 1.54
CSB-PGBD3P0DP91 FAM197Y8-203ENST00000450145 560 ntBASIC24.65■■□□□ 1.54
CSB-PGBD3P0DP91 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC24.65■■□□□ 1.54
CSB-PGBD3P0DP91 PPIE-208ENST00000470213 927 ntTSL 3 BASIC24.65■■□□□ 1.54
CSB-PGBD3P0DP91 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC24.65■■□□□ 1.54
CSB-PGBD3P0DP91 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC24.65■■□□□ 1.54
CSB-PGBD3P0DP91 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC24.65■■□□□ 1.54
CSB-PGBD3P0DP91 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
CSB-PGBD3P0DP91 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC24.65■■□□□ 1.54
CSB-PGBD3P0DP91 UBQLN4P1-201ENST00000461599 1801 ntBASIC24.65■■□□□ 1.54
CSB-PGBD3P0DP91 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
CSB-PGBD3P0DP91 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CSB-PGBD3P0DP91 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
CSB-PGBD3P0DP91 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CSB-PGBD3P0DP91 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC24.65■■□□□ 1.54
CSB-PGBD3P0DP91 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CSB-PGBD3P0DP91 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CSB-PGBD3P0DP91 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC24.64■■□□□ 1.54
CSB-PGBD3P0DP91 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC24.64■■□□□ 1.54
CSB-PGBD3P0DP91 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC24.64■■□□□ 1.54
CSB-PGBD3P0DP91 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.54
CSB-PGBD3P0DP91 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC24.64■■□□□ 1.54
CSB-PGBD3P0DP91 AL773604.1-201ENST00000617417 272 ntBASIC24.64■■□□□ 1.54
CSB-PGBD3P0DP91 AC139530.3-201ENST00000620344 690 ntBASIC24.64■■□□□ 1.54
CSB-PGBD3P0DP91 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
CSB-PGBD3P0DP91 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
CSB-PGBD3P0DP91 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
CSB-PGBD3P0DP91 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC24.64■■□□□ 1.53
CSB-PGBD3P0DP91 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC24.64■■□□□ 1.53
CSB-PGBD3P0DP91 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.53
CSB-PGBD3P0DP91 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC24.63■■□□□ 1.53
CSB-PGBD3P0DP91 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CSB-PGBD3P0DP91 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CSB-PGBD3P0DP91 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
CSB-PGBD3P0DP91 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC24.63■■□□□ 1.53
CSB-PGBD3P0DP91 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC24.63■■□□□ 1.53
CSB-PGBD3P0DP91 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC24.63■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms