Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CAPN1P07384 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.36■□□□□ 0.53
CAPN1P07384 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.36■□□□□ 0.53
CAPN1P07384 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.36■□□□□ 0.53
CAPN1P07384 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.36■□□□□ 0.53
CAPN1P07384 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CAPN1P07384 AP005242.2-201ENST00000580065 1175 ntBASIC18.36■□□□□ 0.53
CAPN1P07384 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CAPN1P07384 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.36■□□□□ 0.53
CAPN1P07384 ANO7L1-203ENST00000602586 1720 ntBASIC18.36■□□□□ 0.53
CAPN1P07384 DGCR10-201ENST00000609839 495 ntBASIC18.36■□□□□ 0.53
CAPN1P07384 AC090164.3-201ENST00000610780 2143 ntBASIC18.36■□□□□ 0.53
CAPN1P07384 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CAPN1P07384 AC130371.2-201ENST00000619443 611 ntBASIC18.36■□□□□ 0.53
CAPN1P07384 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CAPN1P07384 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CAPN1P07384 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.35■□□□□ 0.53
CAPN1P07384 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.35■□□□□ 0.53
CAPN1P07384 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CAPN1P07384 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CAPN1P07384 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CAPN1P07384 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CAPN1P07384 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CAPN1P07384 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CAPN1P07384 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CAPN1P07384 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CAPN1P07384 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CAPN1P07384 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.35■□□□□ 0.53
CAPN1P07384 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CAPN1P07384 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CAPN1P07384 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CAPN1P07384 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.35■□□□□ 0.53
CAPN1P07384 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CAPN1P07384 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.35■□□□□ 0.53
CAPN1P07384 AC008040.2-201ENST00000461049 708 ntBASIC18.35■□□□□ 0.53
CAPN1P07384 Z85996.1-201ENST00000494644 937 ntBASIC18.35■□□□□ 0.53
CAPN1P07384 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.35■□□□□ 0.53
CAPN1P07384 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CAPN1P07384 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CAPN1P07384 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.35■□□□□ 0.53
CAPN1P07384 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.35■□□□□ 0.53
CAPN1P07384 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CAPN1P07384 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.35■□□□□ 0.53
CAPN1P07384 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.35■□□□□ 0.53
CAPN1P07384 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.35■□□□□ 0.53
CAPN1P07384 AC005363.2-201ENST00000618631 242 ntBASIC18.35■□□□□ 0.53
CAPN1P07384 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CAPN1P07384 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CAPN1P07384 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CAPN1P07384 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CAPN1P07384 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.35■□□□□ 0.53
CAPN1P07384 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CAPN1P07384 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CAPN1P07384 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CAPN1P07384 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.34■□□□□ 0.53
CAPN1P07384 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CAPN1P07384 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.34■□□□□ 0.53
CAPN1P07384 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CAPN1P07384 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CAPN1P07384 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CAPN1P07384 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.34■□□□□ 0.53
CAPN1P07384 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CAPN1P07384 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CAPN1P07384 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CAPN1P07384 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CAPN1P07384 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CAPN1P07384 AC005521.1-201ENST00000393351 872 ntBASIC18.34■□□□□ 0.53
CAPN1P07384 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CAPN1P07384 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.34■□□□□ 0.53
CAPN1P07384 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.34■□□□□ 0.53
CAPN1P07384 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.34■□□□□ 0.53
CAPN1P07384 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CAPN1P07384 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.34■□□□□ 0.53
CAPN1P07384 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CAPN1P07384 AC092865.7-201ENST00000641832 219 ntBASIC18.34■□□□□ 0.53
CAPN1P07384 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.34■□□□□ 0.53
CAPN1P07384 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CAPN1P07384 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CAPN1P07384 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CAPN1P07384 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CAPN1P07384 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CAPN1P07384 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CAPN1P07384 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.34■□□□□ 0.53
CAPN1P07384 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CAPN1P07384 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CAPN1P07384 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.34■□□□□ 0.53
CAPN1P07384 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.34■□□□□ 0.53
CAPN1P07384 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.34■□□□□ 0.53
CAPN1P07384 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CAPN1P07384 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CAPN1P07384 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.34■□□□□ 0.53
CAPN1P07384 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CAPN1P07384 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.34■□□□□ 0.53
CAPN1P07384 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CAPN1P07384 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CAPN1P07384 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CAPN1P07384 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
CAPN1P07384 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CAPN1P07384 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CAPN1P07384 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms