Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.73■□□□□ 0.59
APOA4P06727 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.72■□□□□ 0.59
APOA4P06727 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
APOA4P06727 LETM1P2-201ENST00000597330 2178 ntBASIC18.72■□□□□ 0.59
APOA4P06727 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
APOA4P06727 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
APOA4P06727 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
APOA4P06727 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.72■□□□□ 0.59
APOA4P06727 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
APOA4P06727 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
APOA4P06727 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
APOA4P06727 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
APOA4P06727 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
APOA4P06727 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
APOA4P06727 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
APOA4P06727 MESTP1-201ENST00000404287 994 ntBASIC18.72■□□□□ 0.59
APOA4P06727 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
APOA4P06727 SNORA78-201ENST00000459373 127 ntBASIC18.72■□□□□ 0.59
APOA4P06727 AC008040.2-201ENST00000461049 708 ntBASIC18.72■□□□□ 0.59
APOA4P06727 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.72■□□□□ 0.59
APOA4P06727 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
APOA4P06727 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.72■□□□□ 0.59
APOA4P06727 AP000692.2-201ENST00000608391 879 ntBASIC18.72■□□□□ 0.59
APOA4P06727 REXO1L10P-201ENST00000615707 1290 ntBASIC18.72■□□□□ 0.59
APOA4P06727 REXO1L12P-201ENST00000622156 912 ntBASIC18.72■□□□□ 0.59
APOA4P06727 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
APOA4P06727 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
APOA4P06727 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.72■□□□□ 0.59
APOA4P06727 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.72■□□□□ 0.59
APOA4P06727 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.72■□□□□ 0.59
APOA4P06727 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.72■□□□□ 0.59
APOA4P06727 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.72■□□□□ 0.59
APOA4P06727 KRT17P2-201ENST00000300992 1314 ntBASIC18.72■□□□□ 0.59
APOA4P06727 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
APOA4P06727 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
APOA4P06727 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
APOA4P06727 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.71■□□□□ 0.59
APOA4P06727 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
APOA4P06727 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
APOA4P06727 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
APOA4P06727 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
APOA4P06727 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
APOA4P06727 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
APOA4P06727 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
APOA4P06727 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
APOA4P06727 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
APOA4P06727 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.71■□□□□ 0.59
APOA4P06727 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
APOA4P06727 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
APOA4P06727 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
APOA4P06727 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
APOA4P06727 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.71■□□□□ 0.59
APOA4P06727 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.71■□□□□ 0.59
APOA4P06727 AC093827.2-201ENST00000512654 315 ntBASIC18.71■□□□□ 0.59
APOA4P06727 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.71■□□□□ 0.59
APOA4P06727 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
APOA4P06727 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.71■□□□□ 0.59
APOA4P06727 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
APOA4P06727 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
APOA4P06727 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
APOA4P06727 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
APOA4P06727 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
APOA4P06727 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
APOA4P06727 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
APOA4P06727 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
APOA4P06727 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.71■□□□□ 0.59
APOA4P06727 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
APOA4P06727 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
APOA4P06727 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.71■□□□□ 0.59
APOA4P06727 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
APOA4P06727 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
APOA4P06727 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.71■□□□□ 0.58
APOA4P06727 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.7■□□□□ 0.58
APOA4P06727 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
APOA4P06727 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
APOA4P06727 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
APOA4P06727 NOC2LP1-202ENST00000452600 2235 ntBASIC18.7■□□□□ 0.58
APOA4P06727 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
APOA4P06727 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.7■□□□□ 0.58
APOA4P06727 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
APOA4P06727 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.7■□□□□ 0.58
APOA4P06727 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
APOA4P06727 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.7■□□□□ 0.58
APOA4P06727 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
APOA4P06727 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
APOA4P06727 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.7■□□□□ 0.58
APOA4P06727 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
APOA4P06727 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.7■□□□□ 0.58
APOA4P06727 AL162741.1-201ENST00000565563 1558 ntBASIC18.7■□□□□ 0.58
APOA4P06727 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.7■□□□□ 0.58
APOA4P06727 MIR4497-201ENST00000583208 89 ntBASIC18.7■□□□□ 0.58
APOA4P06727 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
APOA4P06727 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.7■□□□□ 0.58
APOA4P06727 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.7■□□□□ 0.58
APOA4P06727 AC066615.1-201ENST00000640911 628 ntBASIC18.7■□□□□ 0.58
APOA4P06727 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
APOA4P06727 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
APOA4P06727 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.7■□□□□ 0.58
APOA4P06727 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
APOA4P06727 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms