Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
COL2A1P02458 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
COL2A1P02458 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
COL2A1P02458 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
COL2A1P02458 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
COL2A1P02458 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
COL2A1P02458 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
COL2A1P02458 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
COL2A1P02458 IGHV3-41-201ENST00000613121 348 ntBASIC21.76■■□□□ 1.07
COL2A1P02458 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.75■■□□□ 1.07
COL2A1P02458 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC21.75■■□□□ 1.07
COL2A1P02458 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC21.75■■□□□ 1.07
COL2A1P02458 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
COL2A1P02458 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
COL2A1P02458 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
COL2A1P02458 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC21.75■■□□□ 1.07
COL2A1P02458 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
COL2A1P02458 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
COL2A1P02458 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
COL2A1P02458 UROS-202ENST00000368778 1556 ntTSL 2 BASIC21.75■■□□□ 1.07
COL2A1P02458 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
COL2A1P02458 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC21.75■■□□□ 1.07
COL2A1P02458 EMBP1-201ENST00000458200 901 ntBASIC21.75■■□□□ 1.07
COL2A1P02458 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC21.75■■□□□ 1.07
COL2A1P02458 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
COL2A1P02458 AC008687.5-201ENST00000593746 558 ntBASIC21.75■■□□□ 1.07
COL2A1P02458 AC104692.2-201ENST00000603054 253 ntBASIC21.75■■□□□ 1.07
COL2A1P02458 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.75■■□□□ 1.07
COL2A1P02458 AC004263.2-201ENST00000617183 678 ntBASIC21.75■■□□□ 1.07
COL2A1P02458 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC21.75■■□□□ 1.07
COL2A1P02458 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
COL2A1P02458 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
COL2A1P02458 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
COL2A1P02458 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC21.75■■□□□ 1.07
COL2A1P02458 NSUN5P1-202ENST00000421140 1535 ntBASIC21.75■■□□□ 1.07
COL2A1P02458 NSUN5P2-203ENST00000457352 1529 ntBASIC21.75■■□□□ 1.07
COL2A1P02458 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL2A1P02458 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
COL2A1P02458 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL2A1P02458 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL2A1P02458 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
COL2A1P02458 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
COL2A1P02458 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL2A1P02458 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL2A1P02458 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
COL2A1P02458 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL2A1P02458 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC21.74■■□□□ 1.07
COL2A1P02458 AC091304.2-201ENST00000564639 760 ntBASIC21.74■■□□□ 1.07
COL2A1P02458 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC21.74■■□□□ 1.07
COL2A1P02458 AC138894.3-201ENST00000603787 634 ntBASIC21.74■■□□□ 1.07
COL2A1P02458 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC21.74■■□□□ 1.07
COL2A1P02458 ANKRD20A8P-203ENST00000641373 517 ntBASIC21.74■■□□□ 1.07
COL2A1P02458 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC21.74■■□□□ 1.07
COL2A1P02458 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC21.74■■□□□ 1.07
COL2A1P02458 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL2A1P02458 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
COL2A1P02458 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
COL2A1P02458 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL2A1P02458 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL2A1P02458 AC009102.3-201ENST00000623118 1491 ntBASIC21.74■■□□□ 1.07
COL2A1P02458 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL2A1P02458 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL2A1P02458 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
COL2A1P02458 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL2A1P02458 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
COL2A1P02458 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL2A1P02458 AC079781.3-201ENST00000449110 356 ntBASIC21.73■■□□□ 1.07
COL2A1P02458 AC091607.1-201ENST00000490318 1060 ntBASIC21.73■■□□□ 1.07
COL2A1P02458 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
COL2A1P02458 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
COL2A1P02458 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
COL2A1P02458 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC21.73■■□□□ 1.07
COL2A1P02458 KLK8-205ENST00000593490 267 ntTSL 3 BASIC21.73■■□□□ 1.07
COL2A1P02458 AC099336.1-202ENST00000602961 463 ntBASIC21.73■■□□□ 1.07
COL2A1P02458 AC124864.1-201ENST00000623408 392 ntBASIC21.73■■□□□ 1.07
COL2A1P02458 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL2A1P02458 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL2A1P02458 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
COL2A1P02458 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL2A1P02458 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL2A1P02458 ASL-204ENST00000395331 1538 ntTSL 5 BASIC21.72■■□□□ 1.07
COL2A1P02458 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL2A1P02458 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL2A1P02458 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL2A1P02458 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
COL2A1P02458 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
COL2A1P02458 FICD-205ENST00000552758 603 ntTSL 2 BASIC21.72■■□□□ 1.07
COL2A1P02458 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC21.72■■□□□ 1.07
COL2A1P02458 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL2A1P02458 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC21.72■■□□□ 1.07
COL2A1P02458 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC21.72■■□□□ 1.07
COL2A1P02458 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
COL2A1P02458 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL2A1P02458 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
COL2A1P02458 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
COL2A1P02458 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL2A1P02458 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC21.72■■□□□ 1.07
COL2A1P02458 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC21.72■■□□□ 1.07
COL2A1P02458 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL2A1P02458 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms