Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LTAP01374 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LTAP01374 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC14.05□□□□□ -0.16
LTAP01374 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LTAP01374 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
LTAP01374 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LTAP01374 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
LTAP01374 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
LTAP01374 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC14.05□□□□□ -0.16
LTAP01374 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LTAP01374 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
LTAP01374 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
LTAP01374 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LTAP01374 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC14.05□□□□□ -0.16
LTAP01374 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC14.05□□□□□ -0.16
LTAP01374 OR2A1-AS1-201ENST00000462305 773 ntBASIC14.05□□□□□ -0.16
LTAP01374 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC14.05□□□□□ -0.16
LTAP01374 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC14.05□□□□□ -0.16
LTAP01374 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
LTAP01374 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
LTAP01374 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
LTAP01374 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
LTAP01374 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
LTAP01374 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC14.05□□□□□ -0.16
LTAP01374 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC14.05□□□□□ -0.16
LTAP01374 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LTAP01374 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
LTAP01374 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LTAP01374 AC008556.1-201ENST00000610908 2040 ntBASIC14.05□□□□□ -0.16
LTAP01374 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
LTAP01374 KRT8P32-201ENST00000512863 1461 ntBASIC14.05□□□□□ -0.16
LTAP01374 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
LTAP01374 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC14.05□□□□□ -0.16
LTAP01374 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LTAP01374 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LTAP01374 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LTAP01374 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LTAP01374 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LTAP01374 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LTAP01374 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LTAP01374 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
LTAP01374 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LTAP01374 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC14.04□□□□□ -0.16
LTAP01374 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LTAP01374 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC14.04□□□□□ -0.16
LTAP01374 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LTAP01374 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
LTAP01374 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC14.04□□□□□ -0.16
LTAP01374 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC14.04□□□□□ -0.16
LTAP01374 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
LTAP01374 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LTAP01374 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
LTAP01374 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LTAP01374 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
LTAP01374 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC14.04□□□□□ -0.16
LTAP01374 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LTAP01374 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC14.04□□□□□ -0.16
LTAP01374 RGMA-211ENST00000557420 989 ntTSL 3 BASIC14.04□□□□□ -0.16
LTAP01374 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LTAP01374 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC14.04□□□□□ -0.16
LTAP01374 MIR6821-201ENST00000617625 74 ntBASIC14.04□□□□□ -0.16
LTAP01374 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LTAP01374 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LTAP01374 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LTAP01374 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LTAP01374 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LTAP01374 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LTAP01374 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LTAP01374 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LTAP01374 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LTAP01374 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
LTAP01374 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
LTAP01374 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC14.04□□□□□ -0.16
LTAP01374 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
LTAP01374 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LTAP01374 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
LTAP01374 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LTAP01374 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LTAP01374 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC14.03□□□□□ -0.16
LTAP01374 AL645608.8-201ENST00000606034 2086 ntBASIC14.03□□□□□ -0.16
LTAP01374 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
LTAP01374 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
LTAP01374 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LTAP01374 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LTAP01374 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LTAP01374 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
LTAP01374 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LTAP01374 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LTAP01374 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LTAP01374 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LTAP01374 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LTAP01374 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LTAP01374 AF201337.1-201ENST00000520239 748 ntBASIC14.03□□□□□ -0.16
LTAP01374 AC105036.2-201ENST00000569468 176 ntBASIC14.03□□□□□ -0.16
LTAP01374 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC14.03□□□□□ -0.16
LTAP01374 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC14.03□□□□□ -0.16
LTAP01374 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC14.03□□□□□ -0.16
LTAP01374 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
LTAP01374 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC14.03□□□□□ -0.16
LTAP01374 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms