Protein–RNA interactions for Protein: P00846

MT-ATP6, ATP synthase subunit a, humanhuman

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ATP6P00846 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.78■□□□□ 0.28
MT-ATP6P00846 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MT-ATP6P00846 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MT-ATP6P00846 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16.78■□□□□ 0.28
MT-ATP6P00846 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.78■□□□□ 0.28
MT-ATP6P00846 TSPY17P-201ENST00000450329 467 ntBASIC16.78■□□□□ 0.28
MT-ATP6P00846 FITM1-202ENST00000559294 800 ntBASIC16.78■□□□□ 0.28
MT-ATP6P00846 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.78■□□□□ 0.28
MT-ATP6P00846 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.78■□□□□ 0.28
MT-ATP6P00846 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MT-ATP6P00846 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MT-ATP6P00846 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MT-ATP6P00846 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
MT-ATP6P00846 AL499627.1-201ENST00000569373 2188 ntBASIC16.78■□□□□ 0.28
MT-ATP6P00846 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MT-ATP6P00846 AC034236.2-201ENST00000606662 1610 ntBASIC16.78■□□□□ 0.28
MT-ATP6P00846 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.77■□□□□ 0.28
MT-ATP6P00846 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MT-ATP6P00846 AC135050.7-201ENST00000624508 2218 ntBASIC16.77■□□□□ 0.28
MT-ATP6P00846 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MT-ATP6P00846 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.77■□□□□ 0.28
MT-ATP6P00846 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MT-ATP6P00846 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.77■□□□□ 0.28
MT-ATP6P00846 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
MT-ATP6P00846 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.77■□□□□ 0.28
MT-ATP6P00846 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.77■□□□□ 0.28
MT-ATP6P00846 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MT-ATP6P00846 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MT-ATP6P00846 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MT-ATP6P00846 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
MT-ATP6P00846 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
MT-ATP6P00846 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MT-ATP6P00846 CCR12P-201ENST00000446203 998 ntBASIC16.77■□□□□ 0.28
MT-ATP6P00846 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.77■□□□□ 0.28
MT-ATP6P00846 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
MT-ATP6P00846 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
MT-ATP6P00846 MIR3180-5-201ENST00000583743 153 ntBASIC16.77■□□□□ 0.28
MT-ATP6P00846 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.77■□□□□ 0.28
MT-ATP6P00846 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.77■□□□□ 0.28
MT-ATP6P00846 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
MT-ATP6P00846 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
MT-ATP6P00846 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
MT-ATP6P00846 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
MT-ATP6P00846 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
MT-ATP6P00846 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
MT-ATP6P00846 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
MT-ATP6P00846 BICD1-207ENST00000551848 1962 ntBASIC16.77■□□□□ 0.27
MT-ATP6P00846 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.77■□□□□ 0.27
MT-ATP6P00846 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
MT-ATP6P00846 MYLKP1-201ENST00000509077 1580 ntBASIC16.77■□□□□ 0.27
MT-ATP6P00846 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.77■□□□□ 0.27
MT-ATP6P00846 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MT-ATP6P00846 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MT-ATP6P00846 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MT-ATP6P00846 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
MT-ATP6P00846 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MT-ATP6P00846 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.76■□□□□ 0.27
MT-ATP6P00846 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MT-ATP6P00846 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MT-ATP6P00846 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MT-ATP6P00846 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.76■□□□□ 0.27
MT-ATP6P00846 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.76■□□□□ 0.27
MT-ATP6P00846 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MT-ATP6P00846 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.76■□□□□ 0.27
MT-ATP6P00846 AL023803.3-201ENST00000615559 522 ntBASIC16.76■□□□□ 0.27
MT-ATP6P00846 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.76■□□□□ 0.27
MT-ATP6P00846 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MT-ATP6P00846 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MT-ATP6P00846 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
MT-ATP6P00846 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.76■□□□□ 0.27
MT-ATP6P00846 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.76■□□□□ 0.27
MT-ATP6P00846 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
MT-ATP6P00846 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MT-ATP6P00846 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MT-ATP6P00846 NEFHP1-201ENST00000412845 2629 ntBASIC16.75■□□□□ 0.27
MT-ATP6P00846 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MT-ATP6P00846 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MT-ATP6P00846 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.75■□□□□ 0.27
MT-ATP6P00846 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.75■□□□□ 0.27
MT-ATP6P00846 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.75■□□□□ 0.27
MT-ATP6P00846 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.75■□□□□ 0.27
MT-ATP6P00846 SNORA78-201ENST00000459373 127 ntBASIC16.75■□□□□ 0.27
MT-ATP6P00846 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.75■□□□□ 0.27
MT-ATP6P00846 AL353719.1-201ENST00000566847 864 ntBASIC16.75■□□□□ 0.27
MT-ATP6P00846 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
MT-ATP6P00846 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
MT-ATP6P00846 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.75■□□□□ 0.27
MT-ATP6P00846 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.75■□□□□ 0.27
MT-ATP6P00846 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
MT-ATP6P00846 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MT-ATP6P00846 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MT-ATP6P00846 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MT-ATP6P00846 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MT-ATP6P00846 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MT-ATP6P00846 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.74■□□□□ 0.27
MT-ATP6P00846 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MT-ATP6P00846 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MT-ATP6P00846 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MT-ATP6P00846 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
MT-ATP6P00846 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms