Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.7■□□□□ 0.74
ZBED1O96006 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
ZBED1O96006 AC068587.9-201ENST00000641814 219 ntBASIC19.7■□□□□ 0.74
ZBED1O96006 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.7■□□□□ 0.74
ZBED1O96006 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZBED1O96006 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.7■□□□□ 0.74
ZBED1O96006 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZBED1O96006 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
ZBED1O96006 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ZBED1O96006 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZBED1O96006 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
ZBED1O96006 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ZBED1O96006 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZBED1O96006 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZBED1O96006 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZBED1O96006 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
ZBED1O96006 AC036111.1-201ENST00000533973 1582 ntBASIC19.7■□□□□ 0.74
ZBED1O96006 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZBED1O96006 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
ZBED1O96006 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZBED1O96006 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
ZBED1O96006 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZBED1O96006 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ZBED1O96006 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
ZBED1O96006 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ZBED1O96006 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZBED1O96006 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.69■□□□□ 0.74
ZBED1O96006 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.69■□□□□ 0.74
ZBED1O96006 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZBED1O96006 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZBED1O96006 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.69■□□□□ 0.74
ZBED1O96006 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ZBED1O96006 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.69■□□□□ 0.74
ZBED1O96006 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.69■□□□□ 0.74
ZBED1O96006 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.69■□□□□ 0.74
ZBED1O96006 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.69■□□□□ 0.74
ZBED1O96006 BX664615.1-201ENST00000443558 458 ntBASIC19.69■□□□□ 0.74
ZBED1O96006 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
ZBED1O96006 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.69■□□□□ 0.74
ZBED1O96006 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.69■□□□□ 0.74
ZBED1O96006 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ZBED1O96006 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZBED1O96006 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZBED1O96006 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZBED1O96006 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ZBED1O96006 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
ZBED1O96006 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
ZBED1O96006 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZBED1O96006 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.69■□□□□ 0.74
ZBED1O96006 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
ZBED1O96006 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZBED1O96006 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZBED1O96006 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
ZBED1O96006 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZBED1O96006 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZBED1O96006 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ZBED1O96006 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.68■□□□□ 0.74
ZBED1O96006 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
ZBED1O96006 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.68■□□□□ 0.74
ZBED1O96006 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.68■□□□□ 0.74
ZBED1O96006 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.68■□□□□ 0.74
ZBED1O96006 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.68■□□□□ 0.74
ZBED1O96006 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
ZBED1O96006 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZBED1O96006 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ZBED1O96006 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZBED1O96006 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.68■□□□□ 0.74
ZBED1O96006 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.68■□□□□ 0.74
ZBED1O96006 AC009947.2-201ENST00000444014 672 ntBASIC19.68■□□□□ 0.74
ZBED1O96006 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZBED1O96006 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.68■□□□□ 0.74
ZBED1O96006 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.68■□□□□ 0.74
ZBED1O96006 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.68■□□□□ 0.74
ZBED1O96006 AC083906.6-201ENST00000641366 219 ntBASIC19.68■□□□□ 0.74
ZBED1O96006 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.68■□□□□ 0.74
ZBED1O96006 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
ZBED1O96006 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZBED1O96006 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZBED1O96006 CROCCP3-202ENST00000420820 1947 ntBASIC19.68■□□□□ 0.74
ZBED1O96006 HEIH-201ENST00000623091 1652 ntBASIC19.68■□□□□ 0.74
ZBED1O96006 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZBED1O96006 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.68■□□□□ 0.74
ZBED1O96006 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZBED1O96006 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ZBED1O96006 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZBED1O96006 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.67■□□□□ 0.74
ZBED1O96006 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.67■□□□□ 0.74
ZBED1O96006 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ZBED1O96006 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.67■□□□□ 0.74
ZBED1O96006 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ZBED1O96006 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.67■□□□□ 0.74
ZBED1O96006 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.67■□□□□ 0.74
ZBED1O96006 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.67■□□□□ 0.74
ZBED1O96006 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZBED1O96006 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZBED1O96006 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZBED1O96006 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZBED1O96006 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.67■□□□□ 0.74
ZBED1O96006 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.67■□□□□ 0.74
ZBED1O96006 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms