Protein–RNA interactions for Protein: O95521

PRAMEF1, PRAME family member 1, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1O95521 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
PRAMEF1O95521 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
PRAMEF1O95521 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PRAMEF1O95521 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PRAMEF1O95521 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.54■□□□□ 0.56
PRAMEF1O95521 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PRAMEF1O95521 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
PRAMEF1O95521 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.54■□□□□ 0.56
PRAMEF1O95521 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PRAMEF1O95521 AC020763.4-201ENST00000623414 4170 ntBASIC18.54■□□□□ 0.56
PRAMEF1O95521 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PRAMEF1O95521 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.54■□□□□ 0.56
PRAMEF1O95521 WIZP1-201ENST00000531444 2299 ntBASIC18.53■□□□□ 0.56
PRAMEF1O95521 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.53■□□□□ 0.56
PRAMEF1O95521 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRAMEF1O95521 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.53■□□□□ 0.56
PRAMEF1O95521 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
PRAMEF1O95521 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRAMEF1O95521 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
PRAMEF1O95521 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRAMEF1O95521 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRAMEF1O95521 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRAMEF1O95521 AC113347.1-201ENST00000413321 391 ntBASIC18.53■□□□□ 0.56
PRAMEF1O95521 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PRAMEF1O95521 ECEL1P3-201ENST00000427961 737 ntBASIC18.53■□□□□ 0.56
PRAMEF1O95521 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.53■□□□□ 0.56
PRAMEF1O95521 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.53■□□□□ 0.56
PRAMEF1O95521 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.53■□□□□ 0.56
PRAMEF1O95521 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
PRAMEF1O95521 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.53■□□□□ 0.56
PRAMEF1O95521 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.53■□□□□ 0.56
PRAMEF1O95521 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRAMEF1O95521 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRAMEF1O95521 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.53■□□□□ 0.56
PRAMEF1O95521 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRAMEF1O95521 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRAMEF1O95521 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.53■□□□□ 0.56
PRAMEF1O95521 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
PRAMEF1O95521 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PRAMEF1O95521 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
PRAMEF1O95521 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
PRAMEF1O95521 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
PRAMEF1O95521 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PRAMEF1O95521 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.52■□□□□ 0.56
PRAMEF1O95521 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.52■□□□□ 0.56
PRAMEF1O95521 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PRAMEF1O95521 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PRAMEF1O95521 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.52■□□□□ 0.56
PRAMEF1O95521 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
PRAMEF1O95521 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PRAMEF1O95521 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PRAMEF1O95521 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.52■□□□□ 0.56
PRAMEF1O95521 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PRAMEF1O95521 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.52■□□□□ 0.56
PRAMEF1O95521 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
PRAMEF1O95521 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PRAMEF1O95521 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.52■□□□□ 0.56
PRAMEF1O95521 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PRAMEF1O95521 LIN28AP1-201ENST00000429574 405 ntBASIC18.52■□□□□ 0.56
PRAMEF1O95521 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.52■□□□□ 0.56
PRAMEF1O95521 AC009947.2-201ENST00000444014 672 ntBASIC18.52■□□□□ 0.56
PRAMEF1O95521 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.52■□□□□ 0.56
PRAMEF1O95521 AC010203.1-204ENST00000548782 407 ntBASIC18.52■□□□□ 0.56
PRAMEF1O95521 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
PRAMEF1O95521 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.56
PRAMEF1O95521 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.52■□□□□ 0.56
PRAMEF1O95521 MYC-208ENST00000641036 567 ntBASIC18.52■□□□□ 0.56
PRAMEF1O95521 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PRAMEF1O95521 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PRAMEF1O95521 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PRAMEF1O95521 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PRAMEF1O95521 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
PRAMEF1O95521 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
PRAMEF1O95521 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.52■□□□□ 0.55
PRAMEF1O95521 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
PRAMEF1O95521 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
PRAMEF1O95521 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PRAMEF1O95521 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRAMEF1O95521 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRAMEF1O95521 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRAMEF1O95521 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRAMEF1O95521 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PRAMEF1O95521 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRAMEF1O95521 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRAMEF1O95521 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRAMEF1O95521 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PRAMEF1O95521 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRAMEF1O95521 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
PRAMEF1O95521 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.51■□□□□ 0.55
PRAMEF1O95521 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.51■□□□□ 0.55
PRAMEF1O95521 ATP5G1P1-201ENST00000448724 379 ntBASIC18.51■□□□□ 0.55
PRAMEF1O95521 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.51■□□□□ 0.55
PRAMEF1O95521 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.51■□□□□ 0.55
PRAMEF1O95521 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRAMEF1O95521 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRAMEF1O95521 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PRAMEF1O95521 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
PRAMEF1O95521 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PRAMEF1O95521 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.51■□□□□ 0.55
PRAMEF1O95521 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms