Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 AC092437.1-201ENST00000624794 1048 ntBASIC14.53□□□□□ -0.08
ZNF253O75346 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF253O75346 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF253O75346 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF253O75346 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
ZNF253O75346 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF253O75346 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
ZNF253O75346 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF253O75346 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF253O75346 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF253O75346 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF253O75346 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC14.53□□□□□ -0.08
ZNF253O75346 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC14.52□□□□□ -0.08
ZNF253O75346 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC14.52□□□□□ -0.08
ZNF253O75346 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC14.52□□□□□ -0.08
ZNF253O75346 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF253O75346 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF253O75346 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF253O75346 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF253O75346 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF253O75346 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF253O75346 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
ZNF253O75346 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF253O75346 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.08
ZNF253O75346 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF253O75346 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC14.52□□□□□ -0.08
ZNF253O75346 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.08
ZNF253O75346 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF253O75346 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF253O75346 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC14.52□□□□□ -0.08
ZNF253O75346 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF253O75346 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
ZNF253O75346 SLC29A4P1-201ENST00000398760 971 ntBASIC14.52□□□□□ -0.09
ZNF253O75346 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC14.52□□□□□ -0.09
ZNF253O75346 RHOD-202ENST00000532559 538 ntTSL 3 BASIC14.52□□□□□ -0.09
ZNF253O75346 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
ZNF253O75346 PNN-205ENST00000556530 601 ntTSL 2 BASIC14.52□□□□□ -0.09
ZNF253O75346 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC14.52□□□□□ -0.09
ZNF253O75346 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC14.52□□□□□ -0.09
ZNF253O75346 AL137784.2-201ENST00000607332 1000 ntBASIC14.52□□□□□ -0.09
ZNF253O75346 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
ZNF253O75346 AC141586.5-201ENST00000624546 2050 ntBASIC14.52□□□□□ -0.09
ZNF253O75346 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
ZNF253O75346 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF253O75346 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF253O75346 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC14.52□□□□□ -0.09
ZNF253O75346 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF253O75346 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF253O75346 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF253O75346 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
ZNF253O75346 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
ZNF253O75346 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.09
ZNF253O75346 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC14.52□□□□□ -0.09
ZNF253O75346 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF253O75346 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC14.51□□□□□ -0.09
ZNF253O75346 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
ZNF253O75346 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF253O75346 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
ZNF253O75346 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC14.51□□□□□ -0.09
ZNF253O75346 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC14.51□□□□□ -0.09
ZNF253O75346 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF253O75346 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF253O75346 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF253O75346 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF253O75346 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF253O75346 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF253O75346 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF253O75346 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.51□□□□□ -0.09
ZNF253O75346 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF253O75346 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF253O75346 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF253O75346 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF253O75346 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
ZNF253O75346 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC14.51□□□□□ -0.09
ZNF253O75346 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC14.51□□□□□ -0.09
ZNF253O75346 CROCCP5-201ENST00000436658 830 ntBASIC14.51□□□□□ -0.09
ZNF253O75346 GATS-209ENST00000454084 1030 ntTSL 3 BASIC14.51□□□□□ -0.09
ZNF253O75346 RHEB-204ENST00000472642 900 ntTSL 3 BASIC14.51□□□□□ -0.09
ZNF253O75346 AC097658.1-201ENST00000475555 843 ntBASIC14.51□□□□□ -0.09
ZNF253O75346 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC14.51□□□□□ -0.09
ZNF253O75346 AC083906.2-201ENST00000511578 360 ntBASIC14.51□□□□□ -0.09
ZNF253O75346 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC14.51□□□□□ -0.09
ZNF253O75346 VPS53-216ENST00000574029 585 ntTSL 4 BASIC14.51□□□□□ -0.09
ZNF253O75346 MYC-209ENST00000641252 345 ntBASIC14.51□□□□□ -0.09
ZNF253O75346 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
ZNF253O75346 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF253O75346 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC14.51□□□□□ -0.09
ZNF253O75346 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC14.51□□□□□ -0.09
ZNF253O75346 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF253O75346 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF253O75346 AC124067.4-201ENST00000519691 2379 ntBASIC14.51□□□□□ -0.09
ZNF253O75346 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF253O75346 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
ZNF253O75346 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC14.5□□□□□ -0.09
ZNF253O75346 AL139384.1-201ENST00000612143 3047 ntBASIC14.5□□□□□ -0.09
ZNF253O75346 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ZNF253O75346 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ZNF253O75346 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ZNF253O75346 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
ZNF253O75346 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms