Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 AL513190.1-201ENST00000621254 727 ntBASIC18.08■□□□□ 0.48
GFRA3O60609 Z92544.3-201ENST00000624747 417 ntBASIC18.08■□□□□ 0.48
GFRA3O60609 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.08■□□□□ 0.48
GFRA3O60609 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
GFRA3O60609 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
GFRA3O60609 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
GFRA3O60609 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
GFRA3O60609 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
GFRA3O60609 CLDN5-201ENST00000403084 2357 ntBASIC18.08■□□□□ 0.48
GFRA3O60609 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GFRA3O60609 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
GFRA3O60609 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GFRA3O60609 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
GFRA3O60609 AC097374.2-201ENST00000618617 1306 ntBASIC18.07■□□□□ 0.48
GFRA3O60609 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.07■□□□□ 0.48
GFRA3O60609 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
GFRA3O60609 MKNK2P1-201ENST00000437526 628 ntBASIC18.07■□□□□ 0.48
GFRA3O60609 KRT18P2-201ENST00000447938 1258 ntBASIC18.07■□□□□ 0.48
GFRA3O60609 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.07■□□□□ 0.48
GFRA3O60609 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GFRA3O60609 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.07■□□□□ 0.48
GFRA3O60609 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC18.07■□□□□ 0.48
GFRA3O60609 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
GFRA3O60609 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
GFRA3O60609 CCND1-203ENST00000536559 553 ntTSL 3 BASIC18.07■□□□□ 0.48
GFRA3O60609 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
GFRA3O60609 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.07■□□□□ 0.48
GFRA3O60609 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.07■□□□□ 0.48
GFRA3O60609 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.07■□□□□ 0.48
GFRA3O60609 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.07■□□□□ 0.48
GFRA3O60609 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GFRA3O60609 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.07■□□□□ 0.48
GFRA3O60609 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
GFRA3O60609 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.07■□□□□ 0.48
GFRA3O60609 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
GFRA3O60609 AC112777.1-201ENST00000540175 1423 ntBASIC18.06■□□□□ 0.48
GFRA3O60609 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
GFRA3O60609 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
GFRA3O60609 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
GFRA3O60609 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
GFRA3O60609 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.06■□□□□ 0.48
GFRA3O60609 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.06■□□□□ 0.48
GFRA3O60609 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GFRA3O60609 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
GFRA3O60609 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GFRA3O60609 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
GFRA3O60609 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GFRA3O60609 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GFRA3O60609 RNF34-208ENST00000555076 593 ntTSL 3 BASIC18.06■□□□□ 0.48
GFRA3O60609 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC18.06■□□□□ 0.48
GFRA3O60609 MIR3180-4-201ENST00000582223 153 ntBASIC18.06■□□□□ 0.48
GFRA3O60609 AC005498.2-205ENST00000593218 784 ntBASIC18.06■□□□□ 0.48
GFRA3O60609 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.06■□□□□ 0.48
GFRA3O60609 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC18.06■□□□□ 0.48
GFRA3O60609 AL139288.1-201ENST00000623748 933 ntBASIC18.06■□□□□ 0.48
GFRA3O60609 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.06■□□□□ 0.48
GFRA3O60609 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
GFRA3O60609 AL024507.2-201ENST00000606070 2574 ntBASIC18.06■□□□□ 0.48
GFRA3O60609 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
GFRA3O60609 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.06■□□□□ 0.48
GFRA3O60609 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
GFRA3O60609 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.06■□□□□ 0.48
GFRA3O60609 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
GFRA3O60609 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GFRA3O60609 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
GFRA3O60609 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.05■□□□□ 0.48
GFRA3O60609 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
GFRA3O60609 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GFRA3O60609 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.05■□□□□ 0.48
GFRA3O60609 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
GFRA3O60609 ABCD1P5-201ENST00000445663 754 ntBASIC18.05■□□□□ 0.48
GFRA3O60609 GAPDHP21-201ENST00000450301 1010 ntBASIC18.05■□□□□ 0.48
GFRA3O60609 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC18.05■□□□□ 0.48
GFRA3O60609 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
GFRA3O60609 LSM12-202ENST00000585388 942 ntTSL 3 BASIC18.05■□□□□ 0.48
GFRA3O60609 MTDHP4-201ENST00000600287 670 ntBASIC18.05■□□□□ 0.48
GFRA3O60609 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.05■□□□□ 0.48
GFRA3O60609 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.05■□□□□ 0.48
GFRA3O60609 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GFRA3O60609 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
GFRA3O60609 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
GFRA3O60609 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC18.05■□□□□ 0.48
GFRA3O60609 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
GFRA3O60609 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
GFRA3O60609 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
GFRA3O60609 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.05■□□□□ 0.48
GFRA3O60609 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.04■□□□□ 0.48
GFRA3O60609 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
GFRA3O60609 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
GFRA3O60609 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.04■□□□□ 0.48
GFRA3O60609 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
GFRA3O60609 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.04■□□□□ 0.48
GFRA3O60609 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GFRA3O60609 INTS4P1-201ENST00000438455 1935 ntBASIC18.04■□□□□ 0.48
GFRA3O60609 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.04■□□□□ 0.48
GFRA3O60609 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
GFRA3O60609 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GFRA3O60609 AC244015.2-201ENST00000616358 1861 ntBASIC18.04■□□□□ 0.48
GFRA3O60609 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GFRA3O60609 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms