Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCNT1O60563 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCNT1O60563 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC21.16■□□□□ 0.98
CCNT1O60563 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCNT1O60563 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCNT1O60563 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCNT1O60563 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCNT1O60563 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCNT1O60563 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCNT1O60563 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
CCNT1O60563 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCNT1O60563 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCNT1O60563 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCNT1O60563 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCNT1O60563 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCNT1O60563 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC21.16■□□□□ 0.98
CCNT1O60563 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCNT1O60563 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC21.16■□□□□ 0.98
CCNT1O60563 PPOX-219ENST00000544598 813 ntTSL 2 BASIC21.16■□□□□ 0.98
CCNT1O60563 AC141257.4-201ENST00000634557 245 ntBASIC21.16■□□□□ 0.98
CCNT1O60563 AC136944.6-201ENST00000634818 245 ntBASIC21.16■□□□□ 0.98
CCNT1O60563 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
CCNT1O60563 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCNT1O60563 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCNT1O60563 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCNT1O60563 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC21.16■□□□□ 0.98
CCNT1O60563 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCNT1O60563 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCNT1O60563 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCNT1O60563 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCNT1O60563 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
CCNT1O60563 AL138781.2-201ENST00000617896 1843 ntBASIC21.15■□□□□ 0.98
CCNT1O60563 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCNT1O60563 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCNT1O60563 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCNT1O60563 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC21.15■□□□□ 0.98
CCNT1O60563 AC073508.3-201ENST00000619697 1419 ntBASIC21.15■□□□□ 0.98
CCNT1O60563 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
CCNT1O60563 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC21.15■□□□□ 0.98
CCNT1O60563 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC21.15■□□□□ 0.98
CCNT1O60563 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCNT1O60563 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCNT1O60563 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCNT1O60563 CD70-202ENST00000423145 881 ntTSL 2 BASIC21.15■□□□□ 0.98
CCNT1O60563 KRT18P57-201ENST00000443599 1254 ntBASIC21.15■□□□□ 0.98
CCNT1O60563 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC21.15■□□□□ 0.98
CCNT1O60563 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCNT1O60563 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CCNT1O60563 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC21.15■□□□□ 0.98
CCNT1O60563 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCNT1O60563 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCNT1O60563 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC21.15■□□□□ 0.98
CCNT1O60563 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCNT1O60563 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCNT1O60563 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC21.15■□□□□ 0.98
CCNT1O60563 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCNT1O60563 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC21.15■□□□□ 0.98
CCNT1O60563 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCNT1O60563 WIZP1-201ENST00000531444 2299 ntBASIC21.15■□□□□ 0.98
CCNT1O60563 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CCNT1O60563 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC21.14■□□□□ 0.98
CCNT1O60563 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCNT1O60563 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC21.14■□□□□ 0.98
CCNT1O60563 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC21.14■□□□□ 0.98
CCNT1O60563 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC21.14■□□□□ 0.98
CCNT1O60563 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCNT1O60563 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCNT1O60563 KRT18P23-201ENST00000435622 1283 ntBASIC21.14■□□□□ 0.97
CCNT1O60563 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC21.14■□□□□ 0.97
CCNT1O60563 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCNT1O60563 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCNT1O60563 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCNT1O60563 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCNT1O60563 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCNT1O60563 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCNT1O60563 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCNT1O60563 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCNT1O60563 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCNT1O60563 LGALS8-AS1-201ENST00000487567 1457 ntBASIC21.13■□□□□ 0.97
CCNT1O60563 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCNT1O60563 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC21.13■□□□□ 0.97
CCNT1O60563 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCNT1O60563 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
CCNT1O60563 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCNT1O60563 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCNT1O60563 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCNT1O60563 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCNT1O60563 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC21.13■□□□□ 0.97
CCNT1O60563 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCNT1O60563 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCNT1O60563 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC21.13■□□□□ 0.97
CCNT1O60563 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC21.13■□□□□ 0.97
CCNT1O60563 TK2-213ENST00000563369 882 ntTSL 5 BASIC21.13■□□□□ 0.97
CCNT1O60563 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCNT1O60563 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC21.13■□□□□ 0.97
CCNT1O60563 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCNT1O60563 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCNT1O60563 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCNT1O60563 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCNT1O60563 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms