Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.84■□□□□ 0.45
PCDH7O60245 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH7O60245 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH7O60245 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
PCDH7O60245 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH7O60245 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH7O60245 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDH7O60245 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH7O60245 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH7O60245 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH7O60245 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
PCDH7O60245 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDH7O60245 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDH7O60245 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.84■□□□□ 0.45
PCDH7O60245 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PCDH7O60245 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PCDH7O60245 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDH7O60245 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.83■□□□□ 0.44
PCDH7O60245 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
PCDH7O60245 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.83■□□□□ 0.44
PCDH7O60245 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDH7O60245 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.83■□□□□ 0.44
PCDH7O60245 Z99916.2-201ENST00000604037 246 ntBASIC17.83■□□□□ 0.44
PCDH7O60245 AC026471.5-201ENST00000615068 467 ntBASIC17.83■□□□□ 0.44
PCDH7O60245 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.83■□□□□ 0.44
PCDH7O60245 MYC-208ENST00000641036 567 ntBASIC17.83■□□□□ 0.44
PCDH7O60245 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDH7O60245 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
PCDH7O60245 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDH7O60245 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PCDH7O60245 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
PCDH7O60245 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.83■□□□□ 0.44
PCDH7O60245 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.83■□□□□ 0.44
PCDH7O60245 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
PCDH7O60245 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH7O60245 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH7O60245 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
PCDH7O60245 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH7O60245 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH7O60245 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
PCDH7O60245 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH7O60245 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH7O60245 AC135050.7-201ENST00000624508 2218 ntBASIC17.82■□□□□ 0.44
PCDH7O60245 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH7O60245 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH7O60245 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH7O60245 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH7O60245 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH7O60245 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH7O60245 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.82■□□□□ 0.44
PCDH7O60245 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH7O60245 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.82■□□□□ 0.44
PCDH7O60245 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDH7O60245 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDH7O60245 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.82■□□□□ 0.44
PCDH7O60245 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.82■□□□□ 0.44
PCDH7O60245 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDH7O60245 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH7O60245 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
PCDH7O60245 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH7O60245 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PCDH7O60245 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
PCDH7O60245 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH7O60245 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH7O60245 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH7O60245 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH7O60245 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PCDH7O60245 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDH7O60245 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDH7O60245 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDH7O60245 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDH7O60245 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDH7O60245 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDH7O60245 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDH7O60245 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDH7O60245 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.81■□□□□ 0.44
PCDH7O60245 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
PCDH7O60245 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDH7O60245 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDH7O60245 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDH7O60245 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDH7O60245 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDH7O60245 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.81■□□□□ 0.44
PCDH7O60245 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDH7O60245 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.81■□□□□ 0.44
PCDH7O60245 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.81■□□□□ 0.44
PCDH7O60245 AC008622.2-201ENST00000617006 1229 ntBASIC17.81■□□□□ 0.44
PCDH7O60245 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDH7O60245 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
PCDH7O60245 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDH7O60245 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
PCDH7O60245 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDH7O60245 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDH7O60245 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDH7O60245 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.81■□□□□ 0.44
PCDH7O60245 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDH7O60245 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDH7O60245 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDH7O60245 AC112777.1-201ENST00000540175 1423 ntBASIC17.81■□□□□ 0.44
PCDH7O60245 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms