Protein–RNA interactions for Protein: O15111

CHUK, Inhibitor of nuclear factor kappa-B kinase subunit alpha, humanhuman

Predictions only

Length 745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHUKO15111 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHUKO15111 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.2■□□□□ 0.66
CHUKO15111 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHUKO15111 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHUKO15111 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHUKO15111 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.2■□□□□ 0.66
CHUKO15111 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHUKO15111 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHUKO15111 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
CHUKO15111 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.2■□□□□ 0.66
CHUKO15111 HTR7P1-202ENST00000624664 4411 ntBASIC19.2■□□□□ 0.66
CHUKO15111 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHUKO15111 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHUKO15111 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.2■□□□□ 0.66
CHUKO15111 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHUKO15111 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHUKO15111 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.2■□□□□ 0.66
CHUKO15111 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.2■□□□□ 0.66
CHUKO15111 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.2■□□□□ 0.66
CHUKO15111 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.2■□□□□ 0.66
CHUKO15111 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.2■□□□□ 0.66
CHUKO15111 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.2■□□□□ 0.66
CHUKO15111 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.2■□□□□ 0.66
CHUKO15111 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.2■□□□□ 0.66
CHUKO15111 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.2■□□□□ 0.66
CHUKO15111 AL445675.2-201ENST00000620291 557 ntBASIC19.2■□□□□ 0.66
CHUKO15111 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHUKO15111 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHUKO15111 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHUKO15111 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHUKO15111 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHUKO15111 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.2■□□□□ 0.66
CHUKO15111 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHUKO15111 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.2■□□□□ 0.66
CHUKO15111 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC19.2■□□□□ 0.66
CHUKO15111 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHUKO15111 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHUKO15111 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.2■□□□□ 0.66
CHUKO15111 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CHUKO15111 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.19■□□□□ 0.66
CHUKO15111 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.19■□□□□ 0.66
CHUKO15111 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHUKO15111 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
CHUKO15111 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHUKO15111 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHUKO15111 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHUKO15111 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHUKO15111 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHUKO15111 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
CHUKO15111 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHUKO15111 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.19■□□□□ 0.66
CHUKO15111 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.19■□□□□ 0.66
CHUKO15111 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
CHUKO15111 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.19■□□□□ 0.66
CHUKO15111 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHUKO15111 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHUKO15111 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHUKO15111 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHUKO15111 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHUKO15111 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.19■□□□□ 0.66
CHUKO15111 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHUKO15111 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHUKO15111 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CHUKO15111 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHUKO15111 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHUKO15111 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.19■□□□□ 0.66
CHUKO15111 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.19■□□□□ 0.66
CHUKO15111 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHUKO15111 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
CHUKO15111 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHUKO15111 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.18■□□□□ 0.66
CHUKO15111 WIZP1-201ENST00000531444 2299 ntBASIC19.18■□□□□ 0.66
CHUKO15111 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.18■□□□□ 0.66
CHUKO15111 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHUKO15111 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHUKO15111 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHUKO15111 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CHUKO15111 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.18■□□□□ 0.66
CHUKO15111 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHUKO15111 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHUKO15111 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.18■□□□□ 0.66
CHUKO15111 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.18■□□□□ 0.66
CHUKO15111 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHUKO15111 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHUKO15111 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHUKO15111 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHUKO15111 FAM197Y1-201ENST00000421178 764 ntBASIC19.18■□□□□ 0.66
CHUKO15111 TSPY7P-201ENST00000431358 1114 ntBASIC19.18■□□□□ 0.66
CHUKO15111 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHUKO15111 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
CHUKO15111 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.18■□□□□ 0.66
CHUKO15111 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.18■□□□□ 0.66
CHUKO15111 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.18■□□□□ 0.66
CHUKO15111 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.18■□□□□ 0.66
CHUKO15111 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.18■□□□□ 0.66
CHUKO15111 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHUKO15111 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHUKO15111 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHUKO15111 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHUKO15111 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms