Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CASQ2O14958 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CASQ2O14958 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
CASQ2O14958 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CASQ2O14958 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CASQ2O14958 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.73■□□□□ 0.43
CASQ2O14958 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.73■□□□□ 0.43
CASQ2O14958 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CASQ2O14958 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CASQ2O14958 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.73■□□□□ 0.43
CASQ2O14958 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CASQ2O14958 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CASQ2O14958 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
CASQ2O14958 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.73■□□□□ 0.43
CASQ2O14958 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.73■□□□□ 0.43
CASQ2O14958 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CASQ2O14958 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CASQ2O14958 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CASQ2O14958 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
CASQ2O14958 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CASQ2O14958 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.72■□□□□ 0.43
CASQ2O14958 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.72■□□□□ 0.43
CASQ2O14958 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CASQ2O14958 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CASQ2O14958 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CASQ2O14958 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CASQ2O14958 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CASQ2O14958 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.72■□□□□ 0.43
CASQ2O14958 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CASQ2O14958 AC093677.2-201ENST00000600169 1863 ntBASIC17.72■□□□□ 0.43
CASQ2O14958 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CASQ2O14958 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CASQ2O14958 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CASQ2O14958 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CASQ2O14958 MCRIP2P1-201ENST00000394346 511 ntBASIC17.72■□□□□ 0.43
CASQ2O14958 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CASQ2O14958 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.72■□□□□ 0.43
CASQ2O14958 AL162412.1-201ENST00000567129 965 ntBASIC17.72■□□□□ 0.43
CASQ2O14958 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.72■□□□□ 0.43
CASQ2O14958 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC17.72■□□□□ 0.43
CASQ2O14958 GRAMD4P4-201ENST00000613563 1115 ntBASIC17.72■□□□□ 0.43
CASQ2O14958 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CASQ2O14958 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CASQ2O14958 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CASQ2O14958 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CASQ2O14958 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.72■□□□□ 0.43
CASQ2O14958 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CASQ2O14958 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
CASQ2O14958 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.72■□□□□ 0.43
CASQ2O14958 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.72■□□□□ 0.43
CASQ2O14958 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CASQ2O14958 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CASQ2O14958 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CASQ2O14958 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CASQ2O14958 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CASQ2O14958 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CASQ2O14958 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CASQ2O14958 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
CASQ2O14958 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CASQ2O14958 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.71■□□□□ 0.43
CASQ2O14958 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CASQ2O14958 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CASQ2O14958 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC17.71■□□□□ 0.43
CASQ2O14958 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.71■□□□□ 0.43
CASQ2O14958 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.71■□□□□ 0.43
CASQ2O14958 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC17.71■□□□□ 0.43
CASQ2O14958 AC100791.3-201ENST00000617619 330 ntBASIC17.71■□□□□ 0.43
CASQ2O14958 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CASQ2O14958 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CASQ2O14958 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CASQ2O14958 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CASQ2O14958 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.71■□□□□ 0.43
CASQ2O14958 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CASQ2O14958 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CASQ2O14958 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CASQ2O14958 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CASQ2O14958 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CASQ2O14958 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CASQ2O14958 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.7■□□□□ 0.42
CASQ2O14958 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CASQ2O14958 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
CASQ2O14958 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CASQ2O14958 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.7■□□□□ 0.42
CASQ2O14958 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CASQ2O14958 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CASQ2O14958 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CASQ2O14958 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CASQ2O14958 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC17.7■□□□□ 0.42
CASQ2O14958 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC17.7■□□□□ 0.42
CASQ2O14958 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.7■□□□□ 0.42
CASQ2O14958 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CASQ2O14958 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.7■□□□□ 0.42
CASQ2O14958 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CASQ2O14958 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.7■□□□□ 0.42
CASQ2O14958 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CASQ2O14958 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CASQ2O14958 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CASQ2O14958 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CASQ2O14958 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CASQ2O14958 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms