Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.99■□□□□ 0.79
FOXN3O00409 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
FOXN3O00409 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
FOXN3O00409 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
FOXN3O00409 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
FOXN3O00409 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
FOXN3O00409 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
FOXN3O00409 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.99■□□□□ 0.79
FOXN3O00409 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
FOXN3O00409 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
FOXN3O00409 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
FOXN3O00409 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.98■□□□□ 0.79
FOXN3O00409 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
FOXN3O00409 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
FOXN3O00409 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
FOXN3O00409 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
FOXN3O00409 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
FOXN3O00409 AL390961.4-201ENST00000623958 2535 ntBASIC19.98■□□□□ 0.79
FOXN3O00409 MCCD1P1-208ENST00000445732 328 ntBASIC19.98■□□□□ 0.79
FOXN3O00409 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.98■□□□□ 0.79
FOXN3O00409 FITM1-202ENST00000559294 800 ntBASIC19.98■□□□□ 0.79
FOXN3O00409 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
FOXN3O00409 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
FOXN3O00409 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
FOXN3O00409 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
FOXN3O00409 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.98■□□□□ 0.79
FOXN3O00409 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.98■□□□□ 0.79
FOXN3O00409 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
FOXN3O00409 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
FOXN3O00409 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
FOXN3O00409 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
FOXN3O00409 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
FOXN3O00409 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
FOXN3O00409 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
FOXN3O00409 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
FOXN3O00409 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
FOXN3O00409 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
FOXN3O00409 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.97■□□□□ 0.79
FOXN3O00409 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
FOXN3O00409 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
FOXN3O00409 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
FOXN3O00409 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
FOXN3O00409 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.97■□□□□ 0.79
FOXN3O00409 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
FOXN3O00409 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.97■□□□□ 0.79
FOXN3O00409 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.97■□□□□ 0.79
FOXN3O00409 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.97■□□□□ 0.79
FOXN3O00409 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
FOXN3O00409 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
FOXN3O00409 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.97■□□□□ 0.79
FOXN3O00409 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.97■□□□□ 0.79
FOXN3O00409 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.97■□□□□ 0.79
FOXN3O00409 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
FOXN3O00409 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
FOXN3O00409 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
FOXN3O00409 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
FOXN3O00409 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
FOXN3O00409 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
FOXN3O00409 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.96■□□□□ 0.79
FOXN3O00409 AL354751.1-201ENST00000412768 1863 ntBASIC19.96■□□□□ 0.79
FOXN3O00409 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
FOXN3O00409 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
FOXN3O00409 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
FOXN3O00409 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
FOXN3O00409 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
FOXN3O00409 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
FOXN3O00409 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.96■□□□□ 0.79
FOXN3O00409 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.96■□□□□ 0.79
FOXN3O00409 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
FOXN3O00409 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
FOXN3O00409 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
FOXN3O00409 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
FOXN3O00409 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.96■□□□□ 0.79
FOXN3O00409 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
FOXN3O00409 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
FOXN3O00409 KRT18P41-201ENST00000518924 1277 ntBASIC19.96■□□□□ 0.79
FOXN3O00409 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.96■□□□□ 0.79
FOXN3O00409 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.96■□□□□ 0.79
FOXN3O00409 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.96■□□□□ 0.79
FOXN3O00409 MIR4497-201ENST00000583208 89 ntBASIC19.96■□□□□ 0.79
FOXN3O00409 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
FOXN3O00409 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.96■□□□□ 0.79
FOXN3O00409 MYC-208ENST00000641036 567 ntBASIC19.96■□□□□ 0.79
FOXN3O00409 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
FOXN3O00409 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.96■□□□□ 0.79
FOXN3O00409 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.96■□□□□ 0.79
FOXN3O00409 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.96■□□□□ 0.79
FOXN3O00409 KRT17P2-201ENST00000300992 1314 ntBASIC19.96■□□□□ 0.79
FOXN3O00409 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
FOXN3O00409 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
FOXN3O00409 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
FOXN3O00409 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
FOXN3O00409 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
FOXN3O00409 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.96■□□□□ 0.79
FOXN3O00409 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
FOXN3O00409 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
FOXN3O00409 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.96■□□□□ 0.79
FOXN3O00409 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
FOXN3O00409 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
FOXN3O00409 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms