Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TNFRSF11BO00300 C1QL1P1-201ENST00000568105 661 ntBASIC17.28■□□□□ 0.36
TNFRSF11BO00300 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.28■□□□□ 0.36
TNFRSF11BO00300 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.28■□□□□ 0.36
TNFRSF11BO00300 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.28■□□□□ 0.36
TNFRSF11BO00300 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.28■□□□□ 0.36
TNFRSF11BO00300 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TNFRSF11BO00300 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TNFRSF11BO00300 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
TNFRSF11BO00300 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
TNFRSF11BO00300 ESPNP-201ENST00000270691 2015 ntBASIC17.28■□□□□ 0.36
TNFRSF11BO00300 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TNFRSF11BO00300 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TNFRSF11BO00300 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TNFRSF11BO00300 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TNFRSF11BO00300 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
TNFRSF11BO00300 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TNFRSF11BO00300 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
TNFRSF11BO00300 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TNFRSF11BO00300 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
TNFRSF11BO00300 KRT8P41-201ENST00000533985 1514 ntBASIC17.27■□□□□ 0.36
TNFRSF11BO00300 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TNFRSF11BO00300 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TNFRSF11BO00300 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TNFRSF11BO00300 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
TNFRSF11BO00300 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TNFRSF11BO00300 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TNFRSF11BO00300 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.27■□□□□ 0.36
TNFRSF11BO00300 TSPY6P-201ENST00000448518 926 ntBASIC17.27■□□□□ 0.36
TNFRSF11BO00300 DLX3-202ENST00000512495 834 ntTSL 2 BASIC17.27■□□□□ 0.36
TNFRSF11BO00300 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TNFRSF11BO00300 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
TNFRSF11BO00300 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.27■□□□□ 0.36
TNFRSF11BO00300 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TNFRSF11BO00300 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TNFRSF11BO00300 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
TNFRSF11BO00300 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
TNFRSF11BO00300 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TNFRSF11BO00300 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TNFRSF11BO00300 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TNFRSF11BO00300 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TNFRSF11BO00300 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.27■□□□□ 0.35
TNFRSF11BO00300 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.27■□□□□ 0.35
TNFRSF11BO00300 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.27■□□□□ 0.35
TNFRSF11BO00300 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.27■□□□□ 0.35
TNFRSF11BO00300 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TNFRSF11BO00300 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.35
TNFRSF11BO00300 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.27■□□□□ 0.35
TNFRSF11BO00300 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.27■□□□□ 0.35
TNFRSF11BO00300 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TNFRSF11BO00300 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
TNFRSF11BO00300 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TNFRSF11BO00300 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
TNFRSF11BO00300 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TNFRSF11BO00300 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TNFRSF11BO00300 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.26■□□□□ 0.35
TNFRSF11BO00300 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.26■□□□□ 0.35
TNFRSF11BO00300 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TNFRSF11BO00300 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TNFRSF11BO00300 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.26■□□□□ 0.35
TNFRSF11BO00300 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.26■□□□□ 0.35
TNFRSF11BO00300 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TNFRSF11BO00300 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TNFRSF11BO00300 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TNFRSF11BO00300 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
TNFRSF11BO00300 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.26■□□□□ 0.35
TNFRSF11BO00300 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TNFRSF11BO00300 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TNFRSF11BO00300 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.26■□□□□ 0.35
TNFRSF11BO00300 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.26■□□□□ 0.35
TNFRSF11BO00300 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
TNFRSF11BO00300 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.26■□□□□ 0.35
TNFRSF11BO00300 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.26■□□□□ 0.35
TNFRSF11BO00300 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.26■□□□□ 0.35
TNFRSF11BO00300 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TNFRSF11BO00300 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.26■□□□□ 0.35
TNFRSF11BO00300 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TNFRSF11BO00300 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TNFRSF11BO00300 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TNFRSF11BO00300 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TNFRSF11BO00300 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TNFRSF11BO00300 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TNFRSF11BO00300 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.26■□□□□ 0.35
TNFRSF11BO00300 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TNFRSF11BO00300 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TNFRSF11BO00300 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TNFRSF11BO00300 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.25■□□□□ 0.35
TNFRSF11BO00300 NBPF21P-201ENST00000425093 1451 ntBASIC17.25■□□□□ 0.35
TNFRSF11BO00300 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
TNFRSF11BO00300 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TNFRSF11BO00300 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
TNFRSF11BO00300 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TNFRSF11BO00300 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TNFRSF11BO00300 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TNFRSF11BO00300 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TNFRSF11BO00300 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TNFRSF11BO00300 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.25■□□□□ 0.35
TNFRSF11BO00300 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.25■□□□□ 0.35
TNFRSF11BO00300 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TNFRSF11BO00300 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms