Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.72■□□□□ 0.59
TRIM49D1C9J1S8 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM49D1C9J1S8 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM49D1C9J1S8 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM49D1C9J1S8 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM49D1C9J1S8 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.72■□□□□ 0.59
TRIM49D1C9J1S8 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
TRIM49D1C9J1S8 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TRIM49D1C9J1S8 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM49D1C9J1S8 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM49D1C9J1S8 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.72■□□□□ 0.59
TRIM49D1C9J1S8 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.72■□□□□ 0.59
TRIM49D1C9J1S8 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.72■□□□□ 0.59
TRIM49D1C9J1S8 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.72■□□□□ 0.59
TRIM49D1C9J1S8 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM49D1C9J1S8 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM49D1C9J1S8 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
TRIM49D1C9J1S8 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM49D1C9J1S8 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.71■□□□□ 0.59
TRIM49D1C9J1S8 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
TRIM49D1C9J1S8 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM49D1C9J1S8 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM49D1C9J1S8 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM49D1C9J1S8 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM49D1C9J1S8 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM49D1C9J1S8 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM49D1C9J1S8 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM49D1C9J1S8 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM49D1C9J1S8 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM49D1C9J1S8 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.71■□□□□ 0.59
TRIM49D1C9J1S8 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM49D1C9J1S8 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
TRIM49D1C9J1S8 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM49D1C9J1S8 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.71■□□□□ 0.59
TRIM49D1C9J1S8 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.71■□□□□ 0.59
TRIM49D1C9J1S8 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.71■□□□□ 0.59
TRIM49D1C9J1S8 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM49D1C9J1S8 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
TRIM49D1C9J1S8 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM49D1C9J1S8 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.71■□□□□ 0.59
TRIM49D1C9J1S8 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.71■□□□□ 0.59
TRIM49D1C9J1S8 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.71■□□□□ 0.59
TRIM49D1C9J1S8 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM49D1C9J1S8 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.71■□□□□ 0.59
TRIM49D1C9J1S8 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.71■□□□□ 0.59
TRIM49D1C9J1S8 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM49D1C9J1S8 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.7■□□□□ 0.58
TRIM49D1C9J1S8 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM49D1C9J1S8 AL357033.4-201ENST00000617703 1807 ntBASIC18.7■□□□□ 0.58
TRIM49D1C9J1S8 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM49D1C9J1S8 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM49D1C9J1S8 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM49D1C9J1S8 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM49D1C9J1S8 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.7■□□□□ 0.58
TRIM49D1C9J1S8 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.7■□□□□ 0.58
TRIM49D1C9J1S8 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.7■□□□□ 0.58
TRIM49D1C9J1S8 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.7■□□□□ 0.58
TRIM49D1C9J1S8 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM49D1C9J1S8 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.7■□□□□ 0.58
TRIM49D1C9J1S8 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
TRIM49D1C9J1S8 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.7■□□□□ 0.58
TRIM49D1C9J1S8 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.7■□□□□ 0.58
TRIM49D1C9J1S8 AC104771.1-201ENST00000603335 964 ntBASIC18.7■□□□□ 0.58
TRIM49D1C9J1S8 AC069544.1-201ENST00000609399 999 ntBASIC18.7■□□□□ 0.58
TRIM49D1C9J1S8 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM49D1C9J1S8 MYC-208ENST00000641036 567 ntBASIC18.7■□□□□ 0.58
TRIM49D1C9J1S8 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM49D1C9J1S8 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
TRIM49D1C9J1S8 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM49D1C9J1S8 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM49D1C9J1S8 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM49D1C9J1S8 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.7■□□□□ 0.58
TRIM49D1C9J1S8 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM49D1C9J1S8 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.69■□□□□ 0.58
TRIM49D1C9J1S8 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.69■□□□□ 0.58
TRIM49D1C9J1S8 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM49D1C9J1S8 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM49D1C9J1S8 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM49D1C9J1S8 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.69■□□□□ 0.58
TRIM49D1C9J1S8 KRT8P3-201ENST00000519669 1449 ntBASIC18.69■□□□□ 0.58
TRIM49D1C9J1S8 AC112777.1-201ENST00000540175 1423 ntBASIC18.69■□□□□ 0.58
TRIM49D1C9J1S8 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM49D1C9J1S8 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM49D1C9J1S8 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.69■□□□□ 0.58
TRIM49D1C9J1S8 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM49D1C9J1S8 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.69■□□□□ 0.58
TRIM49D1C9J1S8 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM49D1C9J1S8 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TRIM49D1C9J1S8 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM49D1C9J1S8 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.69■□□□□ 0.58
TRIM49D1C9J1S8 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.69■□□□□ 0.58
TRIM49D1C9J1S8 AC233263.1-201ENST00000578059 224 ntBASIC18.69■□□□□ 0.58
TRIM49D1C9J1S8 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.69■□□□□ 0.58
TRIM49D1C9J1S8 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.69■□□□□ 0.58
TRIM49D1C9J1S8 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM49D1C9J1S8 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM49D1C9J1S8 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM49D1C9J1S8 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.69■□□□□ 0.58
TRIM49D1C9J1S8 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM49D1C9J1S8 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms