Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC15.04■□□□□ -0
SRRM4A7MD48 AL049637.2-201ENST00000641778 930 ntBASIC15.04■□□□□ -0
SRRM4A7MD48 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC15.04■□□□□ -0
SRRM4A7MD48 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC15.04■□□□□ -0
SRRM4A7MD48 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
SRRM4A7MD48 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SRRM4A7MD48 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SRRM4A7MD48 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC15.03■□□□□ -0
SRRM4A7MD48 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC15.03■□□□□ -0
SRRM4A7MD48 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC15.03■□□□□ -0
SRRM4A7MD48 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC15.03■□□□□ -0
SRRM4A7MD48 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SRRM4A7MD48 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC15.03■□□□□ -0
SRRM4A7MD48 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC15.03■□□□□ -0
SRRM4A7MD48 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
SRRM4A7MD48 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
SRRM4A7MD48 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC15.03■□□□□ -0
SRRM4A7MD48 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC15.03■□□□□ -0
SRRM4A7MD48 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SRRM4A7MD48 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
SRRM4A7MD48 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC15.03■□□□□ -0
SRRM4A7MD48 AC018470.1-201ENST00000624790 3129 ntBASIC15.03■□□□□ -0
SRRM4A7MD48 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
SRRM4A7MD48 MME-217ENST00000616757 1315 ntTSL 5 BASIC15.03■□□□□ -0
SRRM4A7MD48 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SRRM4A7MD48 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
SRRM4A7MD48 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
SRRM4A7MD48 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC15.03■□□□□ -0
SRRM4A7MD48 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC15.03■□□□□ -0
SRRM4A7MD48 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC15.03■□□□□ -0
SRRM4A7MD48 AC012618.2-201ENST00000428058 849 ntBASIC15.03■□□□□ -0
SRRM4A7MD48 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC15.03■□□□□ -0
SRRM4A7MD48 FDX2-206ENST00000492239 773 ntTSL 2 BASIC15.03■□□□□ -0
SRRM4A7MD48 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC15.03■□□□□ -0
SRRM4A7MD48 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC15.03■□□□□ -0
SRRM4A7MD48 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC15.03■□□□□ -0
SRRM4A7MD48 SLC25A1P4-201ENST00000567977 778 ntBASIC15.03■□□□□ -0
SRRM4A7MD48 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC15.03■□□□□ -0
SRRM4A7MD48 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SRRM4A7MD48 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC15.03■□□□□ -0
SRRM4A7MD48 AC008556.1-201ENST00000610908 2040 ntBASIC15.03■□□□□ -0
SRRM4A7MD48 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SRRM4A7MD48 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
SRRM4A7MD48 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SRRM4A7MD48 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
SRRM4A7MD48 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SRRM4A7MD48 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SRRM4A7MD48 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SRRM4A7MD48 LETM1P2-201ENST00000597330 2178 ntBASIC15.02■□□□□ -0
SRRM4A7MD48 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC15.02■□□□□ -0
SRRM4A7MD48 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SRRM4A7MD48 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
SRRM4A7MD48 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SRRM4A7MD48 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SRRM4A7MD48 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC15.02■□□□□ -0
SRRM4A7MD48 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC15.02■□□□□ -0
SRRM4A7MD48 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC15.02■□□□□ -0
SRRM4A7MD48 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
SRRM4A7MD48 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
SRRM4A7MD48 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
SRRM4A7MD48 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
SRRM4A7MD48 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
SRRM4A7MD48 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SRRM4A7MD48 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
SRRM4A7MD48 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
SRRM4A7MD48 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC15.02■□□□□ -0
SRRM4A7MD48 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
SRRM4A7MD48 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC15.02■□□□□ -0
SRRM4A7MD48 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SRRM4A7MD48 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
SRRM4A7MD48 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC15.02■□□□□ -0
SRRM4A7MD48 MFAP1P1-201ENST00000442257 1255 ntBASIC15.02■□□□□ -0
SRRM4A7MD48 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC15.02■□□□□ -0
SRRM4A7MD48 AC097488.1-201ENST00000507834 756 ntBASIC15.02■□□□□ -0
SRRM4A7MD48 PENK-204ENST00000518770 863 ntTSL 2 BASIC15.02■□□□□ -0
SRRM4A7MD48 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC15.02■□□□□ -0
SRRM4A7MD48 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC15.02■□□□□ -0
SRRM4A7MD48 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC15.02■□□□□ -0
SRRM4A7MD48 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC15.02■□□□□ -0
SRRM4A7MD48 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC15.02■□□□□ -0
SRRM4A7MD48 AP001412.1-201ENST00000608405 714 ntBASIC15.02■□□□□ -0
SRRM4A7MD48 REXO1L10P-201ENST00000615707 1290 ntBASIC15.02■□□□□ -0
SRRM4A7MD48 REXO1L12P-201ENST00000622156 912 ntBASIC15.02■□□□□ -0
SRRM4A7MD48 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC15.02□□□□□ -0.01
SRRM4A7MD48 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SRRM4A7MD48 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SRRM4A7MD48 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SRRM4A7MD48 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SRRM4A7MD48 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
SRRM4A7MD48 AC026471.1-201ENST00000564629 3026 ntBASIC15.02□□□□□ -0.01
SRRM4A7MD48 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SRRM4A7MD48 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SRRM4A7MD48 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC15.02□□□□□ -0.01
SRRM4A7MD48 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC15.02□□□□□ -0.01
SRRM4A7MD48 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SRRM4A7MD48 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SRRM4A7MD48 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SRRM4A7MD48 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC15.01□□□□□ -0.01
SRRM4A7MD48 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
SRRM4A7MD48 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms