Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 RNPS1P1-201ENST00000507437 918 ntBASIC18.23■□□□□ 0.51
C4orf47A7E2U8 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.23■□□□□ 0.51
C4orf47A7E2U8 AC106730.1-201ENST00000566722 1090 ntBASIC18.23■□□□□ 0.51
C4orf47A7E2U8 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
C4orf47A7E2U8 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.23■□□□□ 0.51
C4orf47A7E2U8 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.23■□□□□ 0.51
C4orf47A7E2U8 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.23■□□□□ 0.51
C4orf47A7E2U8 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
C4orf47A7E2U8 AL592071.1-201ENST00000611956 408 ntBASIC18.23■□□□□ 0.51
C4orf47A7E2U8 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
C4orf47A7E2U8 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
C4orf47A7E2U8 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
C4orf47A7E2U8 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
C4orf47A7E2U8 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.23■□□□□ 0.51
C4orf47A7E2U8 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
C4orf47A7E2U8 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
C4orf47A7E2U8 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
C4orf47A7E2U8 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
C4orf47A7E2U8 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
C4orf47A7E2U8 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
C4orf47A7E2U8 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
C4orf47A7E2U8 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
C4orf47A7E2U8 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
C4orf47A7E2U8 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.22■□□□□ 0.51
C4orf47A7E2U8 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC18.22■□□□□ 0.51
C4orf47A7E2U8 AF186996.4-201ENST00000467186 377 ntBASIC18.22■□□□□ 0.51
C4orf47A7E2U8 VENTXP7-201ENST00000475503 772 ntBASIC18.22■□□□□ 0.51
C4orf47A7E2U8 AC093909.1-201ENST00000504731 1122 ntBASIC18.22■□□□□ 0.51
C4orf47A7E2U8 GUSBP12-201ENST00000513727 720 ntBASIC18.22■□□□□ 0.51
C4orf47A7E2U8 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.22■□□□□ 0.51
C4orf47A7E2U8 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.22■□□□□ 0.51
C4orf47A7E2U8 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.22■□□□□ 0.51
C4orf47A7E2U8 GPR32P1-201ENST00000601788 811 ntBASIC18.22■□□□□ 0.51
C4orf47A7E2U8 AC010240.3-201ENST00000607688 395 ntBASIC18.22■□□□□ 0.51
C4orf47A7E2U8 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
C4orf47A7E2U8 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
C4orf47A7E2U8 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
C4orf47A7E2U8 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
C4orf47A7E2U8 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
C4orf47A7E2U8 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
C4orf47A7E2U8 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
C4orf47A7E2U8 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.22■□□□□ 0.51
C4orf47A7E2U8 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
C4orf47A7E2U8 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
C4orf47A7E2U8 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
C4orf47A7E2U8 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
C4orf47A7E2U8 ZNF815P-204ENST00000434898 1737 ntBASIC18.21■□□□□ 0.51
C4orf47A7E2U8 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.21■□□□□ 0.51
C4orf47A7E2U8 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
C4orf47A7E2U8 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
C4orf47A7E2U8 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
C4orf47A7E2U8 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
C4orf47A7E2U8 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
C4orf47A7E2U8 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
C4orf47A7E2U8 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
C4orf47A7E2U8 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
C4orf47A7E2U8 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
C4orf47A7E2U8 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
C4orf47A7E2U8 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.21■□□□□ 0.51
C4orf47A7E2U8 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
C4orf47A7E2U8 KRT18P67-201ENST00000432816 1264 ntBASIC18.21■□□□□ 0.51
C4orf47A7E2U8 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.21■□□□□ 0.51
C4orf47A7E2U8 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.21■□□□□ 0.51
C4orf47A7E2U8 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.21■□□□□ 0.51
C4orf47A7E2U8 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
C4orf47A7E2U8 AC148477.8-201ENST00000624298 468 ntBASIC18.21■□□□□ 0.51
C4orf47A7E2U8 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
C4orf47A7E2U8 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
C4orf47A7E2U8 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
C4orf47A7E2U8 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.21■□□□□ 0.51
C4orf47A7E2U8 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.21■□□□□ 0.51
C4orf47A7E2U8 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
C4orf47A7E2U8 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
C4orf47A7E2U8 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
C4orf47A7E2U8 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
C4orf47A7E2U8 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
C4orf47A7E2U8 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.21■□□□□ 0.51
C4orf47A7E2U8 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
C4orf47A7E2U8 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
C4orf47A7E2U8 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.21■□□□□ 0.51
C4orf47A7E2U8 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
C4orf47A7E2U8 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
C4orf47A7E2U8 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
C4orf47A7E2U8 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
C4orf47A7E2U8 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
C4orf47A7E2U8 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
C4orf47A7E2U8 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
C4orf47A7E2U8 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
C4orf47A7E2U8 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
C4orf47A7E2U8 COX10-202ENST00000429152 875 ntTSL 2 BASIC18.2■□□□□ 0.5
C4orf47A7E2U8 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.2■□□□□ 0.5
C4orf47A7E2U8 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
C4orf47A7E2U8 MINOS1P3-201ENST00000457048 203 ntBASIC18.2■□□□□ 0.5
C4orf47A7E2U8 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.2■□□□□ 0.5
C4orf47A7E2U8 AC009065.1-201ENST00000564055 1225 ntBASIC18.2■□□□□ 0.5
C4orf47A7E2U8 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.2■□□□□ 0.5
C4orf47A7E2U8 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
C4orf47A7E2U8 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.2■□□□□ 0.5
C4orf47A7E2U8 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
C4orf47A7E2U8 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms