Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC20.12■□□□□ 0.81
LRRC53A6NM62 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRRC53A6NM62 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRRC53A6NM62 AC067852.2-201ENST00000590513 2313 ntBASIC20.12■□□□□ 0.81
LRRC53A6NM62 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.12■□□□□ 0.81
LRRC53A6NM62 FAM207BP-201ENST00000447172 505 ntBASIC20.12■□□□□ 0.81
LRRC53A6NM62 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.12■□□□□ 0.81
LRRC53A6NM62 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LRRC53A6NM62 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.12■□□□□ 0.81
LRRC53A6NM62 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.12■□□□□ 0.81
LRRC53A6NM62 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
LRRC53A6NM62 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC20.12■□□□□ 0.81
LRRC53A6NM62 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.12■□□□□ 0.81
LRRC53A6NM62 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LRRC53A6NM62 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
LRRC53A6NM62 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRRC53A6NM62 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
LRRC53A6NM62 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.11■□□□□ 0.81
LRRC53A6NM62 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRRC53A6NM62 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LRRC53A6NM62 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRRC53A6NM62 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRRC53A6NM62 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRRC53A6NM62 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.11■□□□□ 0.81
LRRC53A6NM62 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRRC53A6NM62 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRRC53A6NM62 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.11■□□□□ 0.81
LRRC53A6NM62 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.11■□□□□ 0.81
LRRC53A6NM62 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.11■□□□□ 0.81
LRRC53A6NM62 B3GAT3P1-201ENST00000471720 806 ntBASIC20.11■□□□□ 0.81
LRRC53A6NM62 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.11■□□□□ 0.81
LRRC53A6NM62 RARRES2P10-201ENST00000564312 460 ntBASIC20.11■□□□□ 0.81
LRRC53A6NM62 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.11■□□□□ 0.81
LRRC53A6NM62 AC073195.1-201ENST00000607241 877 ntBASIC20.11■□□□□ 0.81
LRRC53A6NM62 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC20.11■□□□□ 0.81
LRRC53A6NM62 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRRC53A6NM62 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRRC53A6NM62 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
LRRC53A6NM62 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRRC53A6NM62 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRRC53A6NM62 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LRRC53A6NM62 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC20.11■□□□□ 0.81
LRRC53A6NM62 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.11■□□□□ 0.81
LRRC53A6NM62 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRRC53A6NM62 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRRC53A6NM62 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.11■□□□□ 0.81
LRRC53A6NM62 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC20.11■□□□□ 0.81
LRRC53A6NM62 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LRRC53A6NM62 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC20.1■□□□□ 0.81
LRRC53A6NM62 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
LRRC53A6NM62 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRRC53A6NM62 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
LRRC53A6NM62 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LRRC53A6NM62 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LRRC53A6NM62 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRRC53A6NM62 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRRC53A6NM62 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC20.1■□□□□ 0.81
LRRC53A6NM62 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRRC53A6NM62 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LRRC53A6NM62 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRRC53A6NM62 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC20.1■□□□□ 0.81
LRRC53A6NM62 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.1■□□□□ 0.81
LRRC53A6NM62 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.1■□□□□ 0.81
LRRC53A6NM62 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.1■□□□□ 0.81
LRRC53A6NM62 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.1■□□□□ 0.81
LRRC53A6NM62 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.1■□□□□ 0.81
LRRC53A6NM62 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRRC53A6NM62 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.1■□□□□ 0.81
LRRC53A6NM62 MIR6786-201ENST00000616843 113 ntBASIC20.1■□□□□ 0.81
LRRC53A6NM62 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
LRRC53A6NM62 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
LRRC53A6NM62 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRRC53A6NM62 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LRRC53A6NM62 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRRC53A6NM62 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LRRC53A6NM62 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRRC53A6NM62 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LRRC53A6NM62 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRRC53A6NM62 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC20.1■□□□□ 0.81
LRRC53A6NM62 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRRC53A6NM62 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRRC53A6NM62 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRRC53A6NM62 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRRC53A6NM62 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRRC53A6NM62 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
LRRC53A6NM62 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC20.09■□□□□ 0.81
LRRC53A6NM62 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRRC53A6NM62 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRRC53A6NM62 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRRC53A6NM62 AC008556.1-201ENST00000610908 2040 ntBASIC20.09■□□□□ 0.81
LRRC53A6NM62 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRRC53A6NM62 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRRC53A6NM62 MESTP1-201ENST00000404287 994 ntBASIC20.09■□□□□ 0.81
LRRC53A6NM62 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC20.09■□□□□ 0.81
LRRC53A6NM62 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.09■□□□□ 0.81
LRRC53A6NM62 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
LRRC53A6NM62 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
LRRC53A6NM62 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LRRC53A6NM62 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.09■□□□□ 0.81
LRRC53A6NM62 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms