Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 HOXB1-202ENST00000577092 1414 ntBASIC17.72■□□□□ 0.43
LRIT2A6NDA9 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRIT2A6NDA9 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.72■□□□□ 0.43
LRIT2A6NDA9 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRIT2A6NDA9 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRIT2A6NDA9 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LRIT2A6NDA9 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LRIT2A6NDA9 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LRIT2A6NDA9 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.71■□□□□ 0.43
LRIT2A6NDA9 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRIT2A6NDA9 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
LRIT2A6NDA9 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.71■□□□□ 0.43
LRIT2A6NDA9 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.71■□□□□ 0.43
LRIT2A6NDA9 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRIT2A6NDA9 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRIT2A6NDA9 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
LRIT2A6NDA9 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
LRIT2A6NDA9 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LRIT2A6NDA9 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.71■□□□□ 0.43
LRIT2A6NDA9 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.71■□□□□ 0.43
LRIT2A6NDA9 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.71■□□□□ 0.43
LRIT2A6NDA9 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.71■□□□□ 0.43
LRIT2A6NDA9 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRIT2A6NDA9 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRIT2A6NDA9 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LRIT2A6NDA9 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRIT2A6NDA9 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRIT2A6NDA9 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.71■□□□□ 0.43
LRIT2A6NDA9 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
LRIT2A6NDA9 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.42
LRIT2A6NDA9 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
LRIT2A6NDA9 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
LRIT2A6NDA9 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
LRIT2A6NDA9 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
LRIT2A6NDA9 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRIT2A6NDA9 AC005082.1-201ENST00000413042 2259 ntBASIC17.7■□□□□ 0.42
LRIT2A6NDA9 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
LRIT2A6NDA9 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRIT2A6NDA9 MYLKP1-201ENST00000509077 1580 ntBASIC17.7■□□□□ 0.42
LRIT2A6NDA9 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRIT2A6NDA9 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.7■□□□□ 0.42
LRIT2A6NDA9 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.7■□□□□ 0.42
LRIT2A6NDA9 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.7■□□□□ 0.42
LRIT2A6NDA9 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRIT2A6NDA9 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRIT2A6NDA9 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRIT2A6NDA9 AP000593.1-201ENST00000393668 712 ntBASIC17.7■□□□□ 0.42
LRIT2A6NDA9 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRIT2A6NDA9 ECEL1P3-201ENST00000427961 737 ntBASIC17.7■□□□□ 0.42
LRIT2A6NDA9 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRIT2A6NDA9 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.7■□□□□ 0.42
LRIT2A6NDA9 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.7■□□□□ 0.42
LRIT2A6NDA9 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.7■□□□□ 0.42
LRIT2A6NDA9 LINC01023-201ENST00000606054 436 ntBASIC17.7■□□□□ 0.42
LRIT2A6NDA9 AL138966.2-201ENST00000621997 464 ntBASIC17.7■□□□□ 0.42
LRIT2A6NDA9 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
LRIT2A6NDA9 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRIT2A6NDA9 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRIT2A6NDA9 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRIT2A6NDA9 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRIT2A6NDA9 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRIT2A6NDA9 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRIT2A6NDA9 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRIT2A6NDA9 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRIT2A6NDA9 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRIT2A6NDA9 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRIT2A6NDA9 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
LRIT2A6NDA9 AC073592.3-201ENST00000625118 1834 ntBASIC17.7■□□□□ 0.42
LRIT2A6NDA9 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRIT2A6NDA9 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.7■□□□□ 0.42
LRIT2A6NDA9 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.7■□□□□ 0.42
LRIT2A6NDA9 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRIT2A6NDA9 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
LRIT2A6NDA9 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRIT2A6NDA9 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRIT2A6NDA9 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRIT2A6NDA9 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRIT2A6NDA9 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRIT2A6NDA9 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
LRIT2A6NDA9 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRIT2A6NDA9 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRIT2A6NDA9 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.69■□□□□ 0.42
LRIT2A6NDA9 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRIT2A6NDA9 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
LRIT2A6NDA9 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRIT2A6NDA9 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.69■□□□□ 0.42
LRIT2A6NDA9 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
LRIT2A6NDA9 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRIT2A6NDA9 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
LRIT2A6NDA9 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRIT2A6NDA9 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRIT2A6NDA9 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRIT2A6NDA9 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.69■□□□□ 0.42
LRIT2A6NDA9 KRT18P23-201ENST00000435622 1283 ntBASIC17.69■□□□□ 0.42
LRIT2A6NDA9 AC009947.2-201ENST00000444014 672 ntBASIC17.69■□□□□ 0.42
LRIT2A6NDA9 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.69■□□□□ 0.42
LRIT2A6NDA9 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.69■□□□□ 0.42
LRIT2A6NDA9 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.69■□□□□ 0.42
LRIT2A6NDA9 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
LRIT2A6NDA9 AC005363.2-201ENST00000618631 242 ntBASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms