Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC162PA2VCL2 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC162PA2VCL2 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC162PA2VCL2 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC162PA2VCL2 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC162PA2VCL2 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC162PA2VCL2 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC162PA2VCL2 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC162PA2VCL2 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CCDC162PA2VCL2 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
CCDC162PA2VCL2 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
CCDC162PA2VCL2 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC162PA2VCL2 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC162PA2VCL2 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC162PA2VCL2 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC162PA2VCL2 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC162PA2VCL2 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC162PA2VCL2 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC162PA2VCL2 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC162PA2VCL2 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC162PA2VCL2 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CCDC162PA2VCL2 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC162PA2VCL2 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC162PA2VCL2 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.65■□□□□ 0.58
CCDC162PA2VCL2 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.65■□□□□ 0.58
CCDC162PA2VCL2 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CCDC162PA2VCL2 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC162PA2VCL2 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.65■□□□□ 0.58
CCDC162PA2VCL2 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.65■□□□□ 0.58
CCDC162PA2VCL2 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC162PA2VCL2 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC162PA2VCL2 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC162PA2VCL2 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC162PA2VCL2 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CCDC162PA2VCL2 AC090164.3-201ENST00000610780 2143 ntBASIC18.65■□□□□ 0.58
CCDC162PA2VCL2 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC162PA2VCL2 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC162PA2VCL2 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC162PA2VCL2 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.65■□□□□ 0.58
CCDC162PA2VCL2 NEFHP1-201ENST00000412845 2629 ntBASIC18.65■□□□□ 0.58
CCDC162PA2VCL2 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC162PA2VCL2 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC162PA2VCL2 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC162PA2VCL2 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC162PA2VCL2 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC162PA2VCL2 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC162PA2VCL2 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC162PA2VCL2 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC162PA2VCL2 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC162PA2VCL2 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC162PA2VCL2 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CCDC162PA2VCL2 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC162PA2VCL2 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC162PA2VCL2 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC162PA2VCL2 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC162PA2VCL2 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.64■□□□□ 0.57
CCDC162PA2VCL2 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC162PA2VCL2 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC162PA2VCL2 AP003041.3-201ENST00000527151 707 ntBASIC18.64■□□□□ 0.57
CCDC162PA2VCL2 AL353719.1-201ENST00000566847 864 ntBASIC18.64■□□□□ 0.57
CCDC162PA2VCL2 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC162PA2VCL2 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC162PA2VCL2 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC162PA2VCL2 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC162PA2VCL2 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC162PA2VCL2 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC162PA2VCL2 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.64■□□□□ 0.57
CCDC162PA2VCL2 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC162PA2VCL2 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC162PA2VCL2 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC162PA2VCL2 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC162PA2VCL2 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC162PA2VCL2 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC162PA2VCL2 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC162PA2VCL2 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC162PA2VCL2 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC162PA2VCL2 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC162PA2VCL2 CYP2D8P-201ENST00000433633 1490 ntBASIC18.64■□□□□ 0.57
CCDC162PA2VCL2 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC162PA2VCL2 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC162PA2VCL2 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC162PA2VCL2 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC162PA2VCL2 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC162PA2VCL2 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC162PA2VCL2 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC162PA2VCL2 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC162PA2VCL2 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC162PA2VCL2 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC162PA2VCL2 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC162PA2VCL2 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC162PA2VCL2 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC162PA2VCL2 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC162PA2VCL2 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC162PA2VCL2 MIR564-202ENST00000385049 94 ntBASIC18.63■□□□□ 0.57
CCDC162PA2VCL2 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC162PA2VCL2 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
CCDC162PA2VCL2 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.63■□□□□ 0.57
CCDC162PA2VCL2 TSPY17P-201ENST00000450329 467 ntBASIC18.63■□□□□ 0.57
CCDC162PA2VCL2 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC162PA2VCL2 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms